RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 DCTN5Q9BTE1 182 aa9.96□□□□□ -0.81
CDH5-208ENST00000614547 SRIP30626 198 aa9.96□□□□□ -0.82
CDH5-208ENST00000614547 COTL1Q14019 142 aa9.96□□□□□ -0.82
CDH5-208ENST00000614547 RPEL1Q2QD12 228 aa9.96□□□□□ -0.82
CDH5-208ENST00000614547 TGIF2LYQ8IUE0 185 aa9.96□□□□□ -0.82
CDH5-208ENST00000614547 TPPP3Q9BW30 176 aa9.96□□□□□ -0.82
CDH5-208ENST00000614547 HES7Q9BYE0 225 aa9.96□□□□□ -0.82
CDH5-208ENST00000614547 PLSCR2Q9NRY7 297 aa9.96□□□□□ -0.82
CDH5-208ENST00000614547 BOKQ9UMX3 212 aaPredicted RBP9.96□□□□□ -0.82
CDH5-208ENST00000614547 MARCH11A6NNE9 402 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 WNT9BO14905 357 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 GNB1P62873 340 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 R3HDM4Q96D70 268 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 ZNF391Q9UJN7 358 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 RNF115Q9Y4L5 304 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 TBL2Q9Y4P3 447 aaKnown RBP9.95□□□□□ -0.82
CDH5-208ENST00000614547 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
CDH5-208ENST00000614547 RPL31P62899 125 aaKnown RBP9.95□□□□□ -0.82
CDH5-208ENST00000614547 CRIP3Q6Q6R5 217 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 Q6ZPA2 131 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 LEAP2Q969E1 77 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 YPEL4Q96NS1 127 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 PXMP4Q9Y6I8 212 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 TRAV24A0A0B4J272 114 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 F2Z2F3 143 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 OR5P3Q8WZ94 311 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 NEU1Q99519 415 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 CACNA1AO00555 2505 aa9.95□□□□□ -0.82
CDH5-208ENST00000614547 LYZL6O75951 148 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 IGHV3-48P01763 117 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 CELA3AP09093 270 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 SSTR5P35346 364 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 LCN12Q6JVE5 192 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 TRAT1Q6PIZ9 186 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 PQLC2Q6ZP29 291 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 MIEN1Q9BRT3 115 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 QTRT1Q9BXR0 403 aaKnown RBP9.94□□□□□ -0.82
CDH5-208ENST00000614547 ARRDC1-AS1Q9H2J1 176 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 LPAR2Q9HBW0 351 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 ABI3Q9P2A4 366 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 WIPI2Q9Y4P8 454 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 SPINT2O43291 252 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 PDE6DO43924 150 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 CRYBB3P26998 211 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 SRD5A2P31213 254 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 HIST3H3Q16695 136 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 UNQ5815/PRO19632Q6UWF5 114 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 LINC01551Q86U37 167 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 DECR2Q9NUI1 292 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 POLDIP2Q9Y2S7 368 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 ARFGEF3Q5TH69 2177 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 CACNA1BQ00975 2339 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 TMEM30CPA0ZSE6 113 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 CA1P00915 261 aaPredicted RBP9.94□□□□□ -0.82
CDH5-208ENST00000614547 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 ACTL10Q5JWF8 245 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 MMD2Q8IY49 270 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 SPEM1Q8N4L4 309 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 SSC4DQ8WTU2 575 aa9.94□□□□□ -0.82
CDH5-208ENST00000614547 CFAP47Q6ZTR5 3102 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 TRAV1-1A0A0B4J248 108 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 CSN3P07498 182 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 GATA2P23769 480 aaPredicted RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 BRS3P32247 399 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 MAS1LP35410 378 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 ATP6V1FQ16864 119 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 ZNF324BQ6AW86 544 aaPredicted RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 INTS1Q8N201 2190 aaKnown RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 SLC24A4Q8NFF2 622 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 RNASE7Q9H1E1 156 aaKnown RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 LRRC30A6NM36 301 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 HSBP1L1C9JCN9 74 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 MT-CO3P00414 261 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 HBZP02008 142 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 ZFP36L1Q07352 338 aaKnown RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 PCOLCEQ15113 449 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 ODF3L1Q8IXM7 274 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 KCNE4Q8WWG9 221 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 BET1LQ9NYM9 111 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 OTOGLQ3ZCN5 2332 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 M0R2Z0 102 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 RRHO14718 337 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 HAND1O96004 215 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 USF1P22415 310 aaPredicted RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 RPL30P62888 115 aaKnown RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 STUMQ69YW2 141 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 WDR74Q6RFH5 385 aaPredicted RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 NANOS1Q8WY41 292 aaKnown RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 FAM122AQ96E09 287 aa9.93□□□□□ -0.82
CDH5-208ENST00000614547 SF3B5Q9BWJ5 86 aaKnown RBP9.93□□□□□ -0.82
CDH5-208ENST00000614547 PTPRSQ13332 1948 aa9.92□□□□□ -0.82
CDH5-208ENST00000614547 HELTA6NFD8 242 aa9.92□□□□□ -0.82
CDH5-208ENST00000614547 MAGEA5P43359 124 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms