RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SLC2A9Q9NRM0 540 aa10.5□□□□□ -0.73
MDC1-209ENST00000613547 COPZ2Q9P299 210 aa10.5□□□□□ -0.73
MDC1-209ENST00000613547 CENPXA8MT69 81 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 IGLV2-23P01705 113 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 CTSDP07339 412 aaPredicted RBP10.49□□□□□ -0.73
MDC1-209ENST00000613547 IL7P13232 177 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 VDAC1P21796 283 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 PIGPP57054 158 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 RND3P61587 244 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 SLC35B1P78383 322 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 CX3CL1P78423 397 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 BAK1Q16611 211 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 ABHD5Q8WTS1 349 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 CLCC1Q96S66 551 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 HSPB9Q9BQS6 159 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 CCDC32Q9BV29 185 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 WDR12Q9GZL7 423 aaKnown RBP10.49□□□□□ -0.73
MDC1-209ENST00000613547 WNT10AQ9GZT5 417 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 PLEKHA2Q9HB19 425 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 PARP11Q9NR21 331 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 FAM212BQ9NTI7 297 aaPredicted RBP10.49□□□□□ -0.73
MDC1-209ENST00000613547 COMMD9Q9P000 198 aa10.49□□□□□ -0.73
MDC1-209ENST00000613547 IGHV7-81A0A0B4J1V7 117 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 PSMB11A5LHX3 300 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 NAP1L6A6NFF2 107 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 SRRM4A7MD48 611 aaKnown RBP10.48□□□□□ -0.73
MDC1-209ENST00000613547 MPPED1O15442 326 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 RAMP3O60896 148 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 B3GALNT1O75752 331 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 ACTL6BO94805 426 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 CNIH1O95406 144 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 CA2P00918 260 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 SAA1P0DJI8 122 aaPredicted RBP10.48□□□□□ -0.73
MDC1-209ENST00000613547 NQO2P16083 231 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 PI3P19957 117 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 TAS2R31P59538 309 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 ERVK-16P61578 105 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 GNB1P62873 340 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 STPG2Q8N412 459 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 OR4X2Q8NGF9 303 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 RHOVQ96L33 236 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 ZNF580Q9UK33 172 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 TENM1Q9UKZ4 2725 aa10.48□□□□□ -0.73
MDC1-209ENST00000613547 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
MDC1-209ENST00000613547 OR2A4O95047 310 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 IGF1P05019 195 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 SERPINE2P07093 398 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 CD40LGP29965 261 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 LPAR6P43657 344 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 BRWD1-AS2P59051 145 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 TMEM267Q0VDI3 215 aaPredicted RBP10.47□□□□□ -0.73
MDC1-209ENST00000613547 ZNF846Q147U1 533 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 MMD2Q8IY49 270 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 COMMD1Q8N668 190 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 DMBX1Q8NFW5 382 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 OR5AU1Q8NGC0 362 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 ARPC1AQ92747 370 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 NOL4LQ96MY1 436 aaPredicted RBP10.47□□□□□ -0.73
MDC1-209ENST00000613547 OR2A7Q96R45 310 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 SDHCQ99643 169 aaPredicted RBP10.47□□□□□ -0.73
MDC1-209ENST00000613547 SLC25A21Q9BQT8 299 aaPredicted RBP10.47□□□□□ -0.73
MDC1-209ENST00000613547 C7orf50Q9BRJ6 194 aaKnown RBP10.47□□□□□ -0.73
MDC1-209ENST00000613547 TPSG1Q9NRR2 321 aa10.47□□□□□ -0.73
MDC1-209ENST00000613547 C3orf85A0A1B0GTC6 90 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 LINC00854A0A1B0GVQ3 168 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 LINC01548A6NM66 108 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 H0Y980 276 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 FCN1O00602 326 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 ATP6V0E1O15342 81 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 FBXO24O75426 580 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 ATG12O94817 140 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 S1PR2O95136 353 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 CRYGBP07316 175 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 RPA2P15927 270 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 FXYD3Q14802 87 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 PRSS8Q16651 343 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 SSX9Q7RTT3 188 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 VKORC1L1Q8N0U8 176 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 OR4A5Q8NH83 315 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 MRGPRFQ96AM1 343 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 R3HDM4Q96D70 268 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 CITED1Q99966 193 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 BET1LQ9NYM9 111 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 LINC00527Q9UJ94 153 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 GPR132Q9UNW8 380 aa10.46□□□□□ -0.73
MDC1-209ENST00000613547 TRAV41A0A0B4J266 112 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 MARCH11A6NNE9 402 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 KBTBD11O94819 623 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 OPN1MWP04001 364 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 OPN1MW2P0DN77 364 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 OPN1MW3P0DN78 364 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 RBMS2Q15434 407 aaKnown RBP10.45□□□□□ -0.74
MDC1-209ENST00000613547 TNXAQ16473 311 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 SGPP2Q8IWX5 399 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 C11orf44Q8N8P7 122 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 GRPEL2Q8TAA5 225 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 RTBDNQ9BSG5 229 aaPredicted RBP10.45□□□□□ -0.74
MDC1-209ENST00000613547 C5orf66Q9H5L9 145 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms