RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 ZNF134P52741 427 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 BLCAPP62952 87 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 SRPXP78539 464 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 CATR1Q13166 79 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 EIF4EBP1Q13541 118 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 C2orf68Q2NKX9 166 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 TMEM95Q3KNT9 176 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 SP6Q3SY56 376 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 CT45A1Q5HYN5 189 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 SLC25A48Q6ZT89 311 aaKnown RBP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 LGI3Q8N145 548 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 C11orf44Q8N8P7 122 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 OR51H1Q8NH63 302 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 CT45A3Q8NHU0 189 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 WIPF2Q8TF74 440 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 CFHR4Q92496 578 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 FYTTD1Q96QD9 318 aaKnown RBP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 ZNF436Q9C0F3 470 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 NPFFR1Q9GZQ6 430 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 RAB18Q9NP72 206 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 DPM3Q9P2X0 92 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 GAB2Q9UQC2 676 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 SAA2-SAA4A0A096LPE2 208 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 BUB1B-PAK6H3BSN5 160 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 BOLA2-SMG1P6H3BVE0 249 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 M0QZ24 198 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 CCSO14618 274 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 SAA2P0DJI9 122 aaPredicted RBP9.2□□□□□ -0.94
LINC00539-204ENST00000608957 HLA-GP17693 338 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 UCP1P25874 307 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 DIAPH2-AS1Q14236 149 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 TPTE2P1Q5T6R2 138 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 ZNF66Q6ZN08 573 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 LYG1Q8N1E2 194 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 LINC00311Q8N616 119 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 LRTM2Q8N967 370 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 C8orf31Q8N9H6 132 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 OR2T6Q8NHC8 308 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 ZNF596Q8TC21 504 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 GLYATL2Q8WU03 294 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 ASB13Q8WXK3 278 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 HSD17B10Q99714 261 aaKnown RBP9.2□□□□□ -0.94
LINC00539-204ENST00000608957 TMEM222Q9H0R3 208 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 PIPOXQ9P0Z9 390 aa9.2□□□□□ -0.94
LINC00539-204ENST00000608957 J3QR06 171 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 M0R1X1 148 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 RAB29O14966 203 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 ADAP1O75689 374 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 SIX6O95475 246 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 HOXB5P09067 269 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 H2BFSP57053 126 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 RAP2BP61225 183 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 RPL39P5Q59GN2 51 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 GSG1LQ6UXU4 331 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 ODF3L1Q8IXM7 274 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 OR9G1Q8NH87 305 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 LHFPL5Q8TAF8 219 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 TCTEX1D2Q8WW35 142 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 WNT10AQ9GZT5 417 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 PITPNC1Q9UKF7 332 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 TMEM56-RWDD3S4R434 201 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 MEGF8Q7Z7M0 2845 aa9.19□□□□□ -0.94
LINC00539-204ENST00000608957 PIGBOS1A0A0B4J2F0 54 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 DUXBA0A1W2PPF3 345 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 C5orf51A6NDU8 294 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 SH2D7A6NKC9 451 aaPredicted RBP9.18□□□□□ -0.94
LINC00539-204ENST00000608957 ADARB2-AS1A8MUL3 147 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 FAM25EA8MYX2 175 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 LEUTXA8MZ59 168 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 OR2A4O95047 310 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 CDS2O95674 445 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 IFNA21P01568 189 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 AMY1AP04745 511 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 SERPINE2P07093 398 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 CD28P10747 220 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 IL3RAP26951 378 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 DUTP33316 252 aaKnown RBP9.18□□□□□ -0.94
LINC00539-204ENST00000608957 RPL30P62888 115 aaKnown RBP9.18□□□□□ -0.94
LINC00539-204ENST00000608957 ZFP69Q49AA0 526 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 TMEM268Q5VZI3 342 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 FAM71F2Q6NXP2 309 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 ZNF695Q8IW36 515 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 TCTEX1D1Q8N7M0 179 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 OR10X1Q8NGY0 326 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 FAM110DQ8TAY7 271 aaPredicted RBP9.18□□□□□ -0.94
LINC00539-204ENST00000608957 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
LINC00539-204ENST00000608957 OR2A7Q96R45 310 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 S1PR3Q99500 378 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 ZNF251Q9BRH9 671 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
LINC00539-204ENST00000608957 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
LINC00539-204ENST00000608957 A0A1W2PPI3 338 aa9.17□□□□□ -0.94
LINC00539-204ENST00000608957 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
LINC00539-204ENST00000608957 LINC00473A8K010 186 aa9.17□□□□□ -0.94
LINC00539-204ENST00000608957 SMLR1H3BR10 107 aa9.17□□□□□ -0.94
LINC00539-204ENST00000608957 TOR1AO14656 332 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms