RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SLC25A46Q96AG3 418 aa9.49□□□□□ -0.89
CTSA-210ENST00000606000 PRR25Q96S07 402 aa9.49□□□□□ -0.89
CTSA-210ENST00000606000 DCUN1D5Q9BTE7 237 aa9.49□□□□□ -0.89
CTSA-210ENST00000606000 XRCC3O43542 346 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 PPYP01298 95 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 ECI1P42126 302 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 FXYD4P59646 89 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 DGCR2P98153 550 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 TMEM69Q5SWH9 247 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 PYHIN1Q6K0P9 492 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
CTSA-210ENST00000606000 CROCCP3Q8IVE0 287 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 TEX45Q8NA69 505 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 OSR1Q8TAX0 266 aaPredicted RBP9.48□□□□□ -0.89
CTSA-210ENST00000606000 SRSF12Q8WXF0 261 aaKnown RBP9.48□□□□□ -0.89
CTSA-210ENST00000606000 RHOVQ96L33 236 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 PHB2Q99623 299 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 ZNF430Q9H8G1 570 aaPredicted RBP9.48□□□□□ -0.89
CTSA-210ENST00000606000 COMMD3Q9UBI1 195 aa9.48□□□□□ -0.89
CTSA-210ENST00000606000 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 LINC01619G3V211 115 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 OVOL1O14753 267 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 RAMP3O60896 148 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 GABARAPO95166 117 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 PRH1P02810 166 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 MYOD1P15172 320 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 RPL5P46777 297 aaKnown RBP9.47□□□□□ -0.89
CTSA-210ENST00000606000 CDK10Q15131 360 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 CTF1Q16619 201 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 C19orf35Q6ZS72 473 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 HAPLN4Q86UW8 402 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 TMEM17Q86X19 198 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 ANKRD13BQ86YJ7 626 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 OR5AP2Q8NGF4 316 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 S100A16Q96FQ6 103 aaKnown RBP9.47□□□□□ -0.89
CTSA-210ENST00000606000 HSD17B10Q99714 261 aaKnown RBP9.47□□□□□ -0.89
CTSA-210ENST00000606000 SLA2Q9H6Q3 261 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 IFT46Q9NQC8 304 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 ANAPC10Q9UM13 185 aa9.47□□□□□ -0.89
CTSA-210ENST00000606000 MRPS7Q9Y2R9 242 aaKnown RBP9.47□□□□□ -0.89
CTSA-210ENST00000606000 TGP01266 2768 aa9.46□□□□□ -0.89
CTSA-210ENST00000606000 ANKRD34BA5PLL1 514 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 HPGDSO60760 199 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 TMEM127O75204 238 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 TRBV12-3P01733 135 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 PMP2P02689 132 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 C11orf87Q6NUJ2 197 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 ZNF818PQ6ZRF7 136 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 SSX9Q7RTT3 188 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 ADAD2Q8NCV1 583 aaKnown RBP9.46□□□□□ -0.9
CTSA-210ENST00000606000 OR4S2Q8NH73 311 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 SLC5A7Q9GZV3 580 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 EHFQ9NZC4 300 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 ADAM30Q9UKF2 790 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 PRELID3BQ9Y3B1 194 aa9.46□□□□□ -0.9
CTSA-210ENST00000606000 A0A1B0GW64 132 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 HMX3A6NHT5 357 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 E7EUB6 86 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 H3BUA1 57 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 SULT1C2O00338 296 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 SAP30O75446 220 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 SLC22A5O76082 557 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 KBTBD11O94819 623 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 HSPB1P04792 205 aaKnown RBP9.45□□□□□ -0.9
CTSA-210ENST00000606000 CD40LGP29965 261 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 CBX5P45973 191 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 RFX2P48378 723 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 ZNF45Q02386 682 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 DYRK1AQ13627 763 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 ZNF66Q6ZN08 573 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 PUSL1Q8N0Z8 303 aaKnown RBP9.45□□□□□ -0.9
CTSA-210ENST00000606000 KCTD12Q96CX2 325 aaKnown RBP9.45□□□□□ -0.9
CTSA-210ENST00000606000 TINAGL1Q9GZM7 467 aaPredicted RBP9.45□□□□□ -0.9
CTSA-210ENST00000606000 FXYD6Q9H0Q3 95 aa9.45□□□□□ -0.9
CTSA-210ENST00000606000 C13orf42A0A1B0GVH6 325 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 TEX22C9J3V5 150 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 MPPED1O15442 326 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 OR9G9P0C7N8 305 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 ELK1P19419 428 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 SPCS2Q15005 226 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 RNASE12Q5GAN4 147 aaKnown RBP9.44□□□□□ -0.9
CTSA-210ENST00000606000 SNX29P2Q8IUI4 249 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 MMD2Q8IY49 270 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 SPAG16Q8N0X2 631 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 OR51H1Q8NH63 302 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 GIMAP1Q8WWP7 306 aa9.44□□□□□ -0.9
CTSA-210ENST00000606000 ZNF2Q9BSG1 426 aaPredicted RBP9.44□□□□□ -0.9
CTSA-210ENST00000606000 CCDC160A6NGH7 325 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 ACTL6BO94805 426 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 OR2A4O95047 310 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 LY86O95711 162 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 RPA2P15927 270 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 NAT1P18440 290 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 HLA-DMAP28067 261 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 GNRHRP30968 328 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 PRSS3P35030 304 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 HRH1P35367 487 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 HERV-K104P61576 105 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms