RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-206ENST00000603722 PTHLHP12272 177 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 ZP3P21754 424 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 AADACP22760 399 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 TGFBR1P36897 503 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 DYRK1AQ13627 763 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 CDK10Q15131 360 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 C10orf55Q5SWW7 151 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 OVCH2Q7RTZ1 564 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 BEST4Q8NFU0 473 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 TCTEX1D2Q8WW35 142 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 RSRP1Q9BUV0 290 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 TAS2R8Q9NYW2 309 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 SMAD5-AS1Q9Y6J3 95 aa12.57□□□□□ -0.4
TUBE1-206ENST00000603722 HUWE1Q7Z6Z7 4374 aaKnown RBP12.57□□□□□ -0.4
TUBE1-206ENST00000603722 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 A6NJ64 397 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 RBMXL2O75526 392 aaKnown RBP12.56□□□□□ -0.4
TUBE1-206ENST00000603722 ACTL6BO94805 426 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 BRI3O95415 125 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 OR9G9P0C7N8 305 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 GP9P14770 177 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 EIF4EBP1Q13541 118 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-206ENST00000603722 TIMM50Q3ZCQ8 353 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 HOGA1Q86XE5 327 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 VKORC1L1Q8N0U8 176 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 ADAD2Q8NCV1 583 aaKnown RBP12.56□□□□□ -0.4
TUBE1-206ENST00000603722 OR4S2Q8NH73 311 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 WWC2-AS2Q96NR7 200 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 GPHA2Q96T91 129 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 HSD17B10Q99714 261 aaKnown RBP12.56□□□□□ -0.4
TUBE1-206ENST00000603722 ELOVL1Q9BW60 279 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 AUNIPQ9H7T9 357 aa12.56□□□□□ -0.4
TUBE1-206ENST00000603722 TRBV12-3P01733 135 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 PRH1P02810 166 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 FCGR2CP31995 323 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 MMD2Q8IY49 270 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 OR13F1Q8NGS4 319 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 SECTM1Q8WVN6 248 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 U3KQK5 164 aa12.55□□□□□ -0.4
TUBE1-206ENST00000603722 TNFSF12O43508 249 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 AIREO43918 545 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 SYNJ2BPP57105 145 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 LSM3P62310 102 aaKnown RBP12.54□□□□□ -0.4
TUBE1-206ENST00000603722 ZNF343Q6P1L6 599 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 ANKRD13BQ86YJ7 626 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 MFSD4AQ8N468 514 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 SNAPC3Q92966 411 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 USMG5Q96IX5 58 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 SPIN2AQ99865 258 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 SPIN2BQ9BPZ2 258 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 CCL28Q9NRJ3 127 aa12.54□□□□□ -0.4
TUBE1-206ENST00000603722 PEF1Q9UBV8 284 aaKnown RBP12.54□□□□□ -0.4
TUBE1-206ENST00000603722 MEIS3P1A6NDR6 274 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 TRIM64CA6NLI5 447 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 OR2A4O95047 310 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 PPYP01298 95 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 BRWD1-AS2P59051 145 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 RHOGP84095 191 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 ZNF45Q02386 682 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 KLF5Q13887 457 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-206ENST00000603722 TSPAN14Q8NG11 270 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 OR9G4Q8NGQ1 327 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 VSTM2AQ8TAG5 236 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 YIPF6Q96EC8 236 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 OR2A7Q96R45 310 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 VCX3AQ9NNX9 186 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 AKIP1Q9NQ31 210 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 ADAM30Q9UKF2 790 aa12.53□□□□□ -0.4
TUBE1-206ENST00000603722 RYR3Q15413 4870 aa12.52□□□□□ -0.4
TUBE1-206ENST00000603722 A0A087WXM4 84 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 HMX3A6NHT5 357 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 FAM223BA6NKX1 122 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 TMEM127O75204 238 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 KBTBD11O94819 623 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 TNFAIP8O95379 198 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 IGLV1-51P01701 117 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 FXYD4P59646 89 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 EXOSC2Q13868 293 aaKnown RBP12.52□□□□□ -0.41
TUBE1-206ENST00000603722 RPEL1Q2QD12 228 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 C19orf35Q6ZS72 473 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 SSX9Q7RTT3 188 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.41
TUBE1-206ENST00000603722 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 XRCC3O43542 346 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
TUBE1-206ENST00000603722 KIR2DS2P43631 304 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 CBX5P45973 191 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 RPL27AP46776 148 aaKnown RBP12.51□□□□□ -0.41
TUBE1-206ENST00000603722 MSMO1Q15800 293 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 UBE2NLQ5JXB2 153 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 CROCCP3Q8IVE0 287 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 SBSPONQ8IVN8 264 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
TUBE1-206ENST00000603722 TTC9CQ8N5M4 171 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 TMEM167AQ8TBQ9 72 aa12.51□□□□□ -0.41
TUBE1-206ENST00000603722 S100A16Q96FQ6 103 aaKnown RBP12.51□□□□□ -0.41
TUBE1-206ENST00000603722 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms