RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RBMXL2O75526 392 aaKnown RBP14.57□□□□□ -0.08
VRK3-225ENST00000601912 IGKV1-16P04430 117 aa14.57□□□□□ -0.08
VRK3-225ENST00000601912 PVALBP20472 110 aaPredicted RBP14.57□□□□□ -0.08
VRK3-225ENST00000601912 REG4Q9BYZ8 158 aa14.57□□□□□ -0.08
VRK3-225ENST00000601912 BOLA1Q9Y3E2 137 aa14.57□□□□□ -0.08
VRK3-225ENST00000601912 A0A1W2PRD5 423 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 A0A1W2PRF3 423 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 A0A1W2PRM7 423 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 E5RGE8 158 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 RNF223E7ERA6 249 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 GATA3P23771 443 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 POU2AF1Q16633 256 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 TMEM177Q53S58 311 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 VKORC1L1Q8N0U8 176 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 LINC01356Q8N9X3 169 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 TMEM140Q9NV12 185 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 NSG2Q9Y328 171 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 APCP25054 2843 aa14.56□□□□□ -0.08
VRK3-225ENST00000601912 FAM90A26D6RGX4 464 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 OR2F2O95006 317 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 CXCL2P19875 107 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 POLR2GP62487 172 aaKnown RBP eCLIP14.55□□□□□ -0.08
VRK3-225ENST00000601912 OR2F1Q13607 317 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 MIDNQ504T8 468 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 CCDC144NLQ6NUI1 221 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 ACOT7LQ6ZUV0 252 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 OR8H3Q8N146 312 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 OR4A16Q8NH70 328 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 HARBI1Q96MB7 349 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 PLSCR3Q9NRY6 295 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 CACFD1Q9UGQ2 172 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 RCL1Q9Y2P8 373 aaKnown RBP14.55□□□□□ -0.08
VRK3-225ENST00000601912 TBL2Q9Y4P3 447 aaKnown RBP14.55□□□□□ -0.08
VRK3-225ENST00000601912 AUP1Q9Y679 476 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 A0A0D9SG52 128 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 OOSP1A8MZH6 123 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 NXPH3O95157 252 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 AP2S1P53680 142 aaPredicted RBP14.55□□□□□ -0.08
VRK3-225ENST00000601912 RPS16P62249 146 aaKnown RBP14.55□□□□□ -0.08
VRK3-225ENST00000601912 VAMP2P63027 116 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 ZNF345Q14585 488 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 Q96MF0 132 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 MAGT1Q9H0U3 335 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 HIF1ANQ9NWT6 349 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 HILPDAQ9Y5L2 63 aa14.55□□□□□ -0.08
VRK3-225ENST00000601912 FASNP49327 2511 aaKnown RBP14.54□□□□□ -0.08
VRK3-225ENST00000601912 SSSCA1O60232 199 aa14.54□□□□□ -0.08
VRK3-225ENST00000601912 MED6O75586 246 aa14.54□□□□□ -0.08
VRK3-225ENST00000601912 LDLRAD2Q5SZI1 272 aa14.54□□□□□ -0.08
VRK3-225ENST00000601912 OR4A47Q6IF82 309 aa14.54□□□□□ -0.08
VRK3-225ENST00000601912 LHFPL4Q7Z7J7 247 aa14.54□□□□□ -0.08
VRK3-225ENST00000601912 MS4A7Q9GZW8 240 aaPredicted RBP14.54□□□□□ -0.08
VRK3-225ENST00000601912 C7orf69Q9H7B7 122 aa14.54□□□□□ -0.08
VRK3-225ENST00000601912 ABCA2Q9BZC7 2435 aa14.54□□□□□ -0.08
VRK3-225ENST00000601912 IGHV3-72A0A0B4J1Y9 119 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 A0A1W2PPI3 338 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 OR9G9P0C7N8 305 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 S100A11P31949 105 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 LGALS7P47929 136 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 TMUB2Q71RG4 321 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 RAB40CQ96S21 281 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 ARL6Q9H0F7 186 aa14.53□□□□□ -0.08
VRK3-225ENST00000601912 RNF222A6NCQ9 220 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 SRRM4A7MD48 611 aaKnown RBP14.52□□□□□ -0.08
VRK3-225ENST00000601912 SYNGR2O43760 224 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 CHST1O43916 411 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 P2RY1P47900 373 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 TNFRSF9Q07011 255 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 SSX2Q16385 188 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 VSTM2AQ8TAG5 236 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 MALSU1Q96EH3 234 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 AQP10Q96PS8 301 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 ZC4H2Q9NQZ6 224 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 HSPB7Q9UBY9 170 aa14.52□□□□□ -0.08
VRK3-225ENST00000601912 CENPVL3A0A0U1RRI6 287 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 TIMM23O14925 209 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 KCNAB3O43448 404 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 TSC22D2O75157 780 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 CD1BP29016 333 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 RELBQ01201 579 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 KRTAP1-3Q8IUG1 177 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 KCNRGQ8N5I3 272 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 BET1LQ9NYM9 111 aa14.52□□□□□ -0.09
VRK3-225ENST00000601912 NPFFO15130 113 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 GPR137BO60478 399 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 IFNA17P01571 189 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 SAA1P0DJI8 122 aaPredicted RBP14.51□□□□□ -0.09
VRK3-225ENST00000601912 RPL12P30050 165 aaKnown RBP14.51□□□□□ -0.09
VRK3-225ENST00000601912 OR2B8PP59922 312 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 UBE2KP61086 200 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 RPL23AP62750 156 aaKnown RBP14.51□□□□□ -0.09
VRK3-225ENST00000601912 OPCMLQ14982 345 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 VMA21Q3ZAQ7 101 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 AARDQ4LEZ3 155 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 ZNF429Q86V71 674 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 RBMXL1Q96E39 390 aaKnown RBP14.51□□□□□ -0.09
VRK3-225ENST00000601912 RNF5Q99942 180 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 QTRT1Q9BXR0 403 aaKnown RBP14.51□□□□□ -0.09
VRK3-225ENST00000601912 PRNDQ9UKY0 176 aa14.51□□□□□ -0.09
VRK3-225ENST00000601912 CSMD2Q7Z408 3487 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms