RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PIP4P2Q8N4L2 257 aa18.21■□□□□ 0.51
IRF3-228ENST00000601291 OR4D5Q8NGN0 318 aa18.21■□□□□ 0.51
IRF3-228ENST00000601291 MS4A7Q9GZW8 240 aaPredicted RBP18.21■□□□□ 0.51
IRF3-228ENST00000601291 TMEM140Q9NV12 185 aa18.21■□□□□ 0.51
IRF3-228ENST00000601291 PRRC2AP48634 2157 aaKnown RBP18.2■□□□□ 0.5
IRF3-228ENST00000601291 MED13LQ71F56 2210 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 PDZD2O15018 2839 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 S100A10P60903 97 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 HABP2Q14520 560 aaPredicted RBP18.2■□□□□ 0.5
IRF3-228ENST00000601291 IZUMO4Q1ZYL8 232 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 Q5BKY6 102 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 RUSC1-AS1Q66K80 236 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 NOXA1Q86UR1 476 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 VKORC1L1Q8N0U8 176 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 HYLS1Q96M11 299 aa18.2■□□□□ 0.5
IRF3-228ENST00000601291 G3V3Q6 166 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 MPC2O95563 127 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 IGHV4-38-2P0DP08 117 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 NKX2-1P43699 371 aaPredicted RBP18.19■□□□□ 0.5
IRF3-228ENST00000601291 LGALS7P47929 136 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 EIF2B2P49770 351 aaKnown RBP18.19■□□□□ 0.5
IRF3-228ENST00000601291 RAB32Q13637 225 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 Q6ZRM9 215 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 DYNAPQ8N1N2 210 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 THAP6Q8TBB0 222 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 C17orf50Q8WW18 174 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 CFHR4Q92496 578 aa18.19■□□□□ 0.5
IRF3-228ENST00000601291 VPS13CQ709C8 3753 aa18.18■□□□□ 0.5
IRF3-228ENST00000601291 PITX3O75364 302 aa18.18■□□□□ 0.5
IRF3-228ENST00000601291 RBMXL2O75526 392 aaKnown RBP18.18■□□□□ 0.5
IRF3-228ENST00000601291 AVPP01185 164 aa18.18■□□□□ 0.5
IRF3-228ENST00000601291 OR4A47Q6IF82 309 aa18.18■□□□□ 0.5
IRF3-228ENST00000601291 BRD3OSQ6XYD6 125 aa18.18■□□□□ 0.5
IRF3-228ENST00000601291 VSTM2AQ8TAG5 236 aa18.18■□□□□ 0.5
IRF3-228ENST00000601291 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.18■□□□□ 0.5
IRF3-228ENST00000601291 TRAV14DV4A0A0A6YYC5 116 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 ST8SIA3O43173 380 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 VENTXO95231 258 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 RLN2P04090 185 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 BRS3P32247 399 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 VMA21Q3ZAQ7 101 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 C11orf87Q6NUJ2 197 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 OR4A16Q8NH70 328 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 AJUBAQ96IF1 538 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 RNF5Q99942 180 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 WNK2Q9Y3S1 2297 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 SRRM4A7MD48 611 aaKnown RBP18.17■□□□□ 0.5
IRF3-228ENST00000601291 SNAPC5O75971 98 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 MBPP02686 304 aaPredicted RBP18.17■□□□□ 0.5
IRF3-228ENST00000601291 SAA1P0DJI8 122 aaPredicted RBP18.17■□□□□ 0.5
IRF3-228ENST00000601291 BPIFB3P59826 476 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 KLF17Q5JT82 389 aaPredicted RBP18.17■□□□□ 0.5
IRF3-228ENST00000601291 FOXRED2Q8IWF2 684 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 RBMXL1Q96E39 390 aaKnown RBP18.17■□□□□ 0.5
IRF3-228ENST00000601291 TSNAXQ99598 290 aaKnown RBP18.17■□□□□ 0.5
IRF3-228ENST00000601291 BET1LQ9NYM9 111 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 LSM5Q9Y4Y9 91 aaKnown RBP18.17■□□□□ 0.5
IRF3-228ENST00000601291 POMT1Q9Y6A1 747 aa18.17■□□□□ 0.5
IRF3-228ENST00000601291 FXYD6-FXYD2A0A087WZ82 144 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 WRBO00258 174 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 IGKV1D-33P01593 117 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 IGKV1-33P01594 117 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 OR9G9P0C7N8 305 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 PRSS54Q6PEW0 395 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 CACFD1Q9UGQ2 172 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 FAM96BQ9Y3D0 163 aa18.16■□□□□ 0.5
IRF3-228ENST00000601291 FAM90A26D6RGX4 464 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 K7EPK0 472 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 MOSP00540 346 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 SLC25A4P12235 298 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 PAX6P26367 422 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 UBE2KP61086 200 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 CXorf66Q5JRM2 361 aaPredicted RBP18.15■□□□□ 0.5
IRF3-228ENST00000601291 PUSL1Q8N0Z8 303 aaKnown RBP18.15■□□□□ 0.5
IRF3-228ENST00000601291 FAM71E2Q8N5Q1 922 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 OR11H4Q8NGC9 324 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 OR2T10Q8NGZ9 312 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 OR4A5Q8NH83 315 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 MBD2Q9UBB5 411 aa18.15■□□□□ 0.5
IRF3-228ENST00000601291 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.15■□□□□ 0.57e-9■■■■■ 30
IRF3-228ENST00000601291 NXPH3O95157 252 aa18.14■□□□□ 0.49
IRF3-228ENST00000601291 SNRNP70P08621 437 aaKnown RBP18.14■□□□□ 0.49
IRF3-228ENST00000601291 RELBQ01201 579 aa18.14■□□□□ 0.49
IRF3-228ENST00000601291 ID3Q02535 119 aa18.14■□□□□ 0.49
IRF3-228ENST00000601291 HES1Q14469 280 aa18.14■□□□□ 0.49
IRF3-228ENST00000601291 NANPQ8TBE9 248 aa18.14■□□□□ 0.49
IRF3-228ENST00000601291 NSG2Q9Y328 171 aa18.14■□□□□ 0.49
IRF3-228ENST00000601291 A0A0U1RQK1 487 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 DEDDO75618 318 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 KBTBD11O94819 623 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 IGLV2-23P01705 113 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 NKX2-5P52952 324 aaPredicted RBP18.13■□□□□ 0.49
IRF3-228ENST00000601291 OR2B8PP59922 312 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 TEX29Q8N6K0 151 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 PRNDQ9UKY0 176 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 C15orf61A6NNL5 157 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 UPK2O00526 184 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 SPDEFO95238 335 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 IL6RP08887 468 aaPredicted RBP18.13■□□□□ 0.49
IRF3-228ENST00000601291 FBP1P09467 338 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms