RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CRYBA1P05813 215 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 ANXA7P20073 488 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 DEFA1P59665 94 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 DEFA3P59666 94 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 RPL15P61313 204 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 DHODHQ02127 395 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 C5orf64Q2M2E5 130 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 NRARPQ7Z6K4 114 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 SLC25A42Q86VD7 318 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 SGPP2Q8IWX5 399 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 PLEKHA2Q9HB19 425 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 PALMDQ9NP74 551 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 FAM212BQ9NTI7 297 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 KIAA1456Q9P272 454 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 METTL1Q9UBP6 276 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 TRAV6A0A075B6T7 132 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 M0QZK8 103 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 SAA1P0DJI8 122 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 RPA2P15927 270 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 UCP1P25874 307 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 UBE2KP61086 200 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 PPP1R1AQ13522 171 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 MRGPRG-AS1Q2M3A8 158 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 SSX9Q7RTT3 188 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 ENKURQ8TC29 256 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 GLYATL2Q8WU03 294 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 RASL11BQ9BPW5 248 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 BEX1Q9HBH7 125 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 NUDT15Q9NV35 164 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 COMMD9Q9P000 198 aa15.87■□□□□ 0.13
SHKBP1-222ENST00000600320 FCN1O00602 326 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 SPNP16150 400 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 TAS2R31P59538 309 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 DCTN2Q13561 401 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 TMEM187Q14656 261 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 VMA21Q3ZAQ7 101 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 TMEM128Q5BJH2 165 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 LHFPL5Q8TAF8 219 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 R3HDM4Q96D70 268 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 GALNT14Q96FL9 552 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 HSPB9Q9BQS6 159 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 RANBP3Q9H6Z4 567 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 SIGLEC9Q9Y336 463 aa15.86■□□□□ 0.13
SHKBP1-222ENST00000600320 TSPAN9O75954 239 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 NDUFA7O95182 113 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 HRASP01112 189 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 NQO2P16083 231 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 G6PCP35575 357 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 POU2AF1Q16633 256 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 TRIM16LQ309B1 348 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 TMEM95Q3KNT9 176 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 C9orf152Q5JTZ5 239 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 LIN54Q6MZP7 749 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 PUSL1Q8N0Z8 303 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 Q8N2B8 174 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 TEX45Q8NA69 505 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 DUSP18Q8NEJ0 188 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 RHOVQ96L33 236 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 CLCC1Q96S66 551 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 PRSS22Q9GZN4 317 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 TMEM222Q9H0R3 208 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 NUBP2Q9Y5Y2 271 aa15.85■□□□□ 0.13
SHKBP1-222ENST00000600320 LINC01548A6NM66 108 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 SFT2D2O95562 160 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 SERPINE2P07093 398 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 H2AFB2P0C5Z0 115 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 HKR1P10072 659 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 RAG2P55895 527 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 RAB25P57735 213 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 PJVKQ0ZLH3 352 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 PLGLAQ15195 96 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 OR4A47Q6IF82 309 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 KCNIP3Q9Y2W7 256 aa15.84■□□□□ 0.13
SHKBP1-222ENST00000600320 IGHV7-81A0A0B4J1V7 117 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 TRAV3A0A0B4J244 114 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 B3GALNT1O75752 331 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 OR2A4O95047 310 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 CDS2O95674 445 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 CA2P00918 260 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 KRASP01116 189 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 IGKV1-5P01602 117 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 HLA-DRB1P01911 266 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 IL6RP08887 468 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 OR4E1P0C645 316 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 VAMP1P23763 118 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 SSBP2P81877 361 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 SELENOHQ8IZQ5 122 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 SEC22AQ96IW7 307 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 OR2A7Q96R45 310 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 TMEM140Q9NV12 185 aa15.83■□□□□ 0.12
SHKBP1-222ENST00000600320 C9orf170A2RU37 121 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 MARCH11A6NNE9 402 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 KBTBD11O94819 623 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 MECP2P51608 486 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 UBE2MP61081 183 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 ERVK-16P61578 105 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 NDPQ00604 133 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 PRSS8Q16651 343 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 ANKRD55Q3KP44 614 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 PPP1R27Q86WC6 154 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms