RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 TEX45Q8NA69 505 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 RITA1Q96K30 269 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 RTBDNQ9BSG5 229 aaPredicted RBP13.29□□□□□ -0.28
USHBP1-210ENST00000600286 C16orf95Q9H693 158 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 PLEKHA2Q9HB19 425 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 COMMD9Q9P000 198 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 H0Y980 276 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 PLA2G10O15496 165 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 SLC25A17O43808 307 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 ACTL6BO94805 426 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 NDUFB6O95139 128 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 CNTFRP26992 372 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 VDAC2P45880 294 aaPredicted RBP13.28□□□□□ -0.28
USHBP1-210ENST00000600286 CCR6P51684 374 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 UBE2KP61086 200 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 DHODHQ02127 395 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 ASAH1Q13510 395 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 TRIM16LQ309B1 348 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 CENPSQ8N2Z9 138 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 FAM71E2Q8N5Q1 922 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 DMBX1Q8NFW5 382 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 C19orf24Q9BVV8 132 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 FBXL15Q9H469 300 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 NAA60Q9H7X0 242 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 VSIG4Q9Y279 399 aa13.28□□□□□ -0.28
USHBP1-210ENST00000600286 CLPSL1A2RUU4 121 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 RAMP3O60896 148 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 OR2A4O95047 310 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 CNIH1O95406 144 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 FBLN7Q53RD9 439 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 SLC35E3Q7Z769 313 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 PPP1R27Q86WC6 154 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 FOXRED2Q8IWF2 684 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 MRGPRFQ96AM1 343 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 RHOVQ96L33 236 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 OR2A7Q96R45 310 aa13.27□□□□□ -0.29
USHBP1-210ENST00000600286 TMEM89A2RUT3 159 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 CRYM-AS1A6NIL9 109 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 HLA-DRB1P01911 266 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 UBE2MP61081 183 aaKnown RBP13.26□□□□□ -0.29
USHBP1-210ENST00000600286 TMEM128Q5BJH2 165 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 ENKURQ8TC29 256 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 ABHD5Q8WTS1 349 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 R3HDM4Q96D70 268 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 CLCC1Q96S66 551 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 GON7Q9BXV9 100 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 ZNF702PQ9H963 129 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 SIGLEC9Q9Y336 463 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 RNF114Q9Y508 228 aa13.26□□□□□ -0.29
USHBP1-210ENST00000600286 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
USHBP1-210ENST00000600286 S1PR2O95136 353 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 IGHG2P01859 326 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 AMY1AP04745 511 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 SLC6A1P30531 599 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 BRWD1-AS2P59051 145 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 SRPXP78539 464 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 RELBQ01201 579 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 ZNF562Q6V9R5 426 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 SSX9Q7RTT3 188 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 MMD2Q8IY49 270 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 Q8N2B8 174 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 ADAD2Q8NCV1 583 aaKnown RBP13.25□□□□□ -0.29
USHBP1-210ENST00000600286 LINC01006Q8NI28 216 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 RNASE11Q8TAA1 199 aaKnown RBP13.25□□□□□ -0.29
USHBP1-210ENST00000600286 MMP24Q9Y5R2 645 aa13.25□□□□□ -0.29
USHBP1-210ENST00000600286 SH2D7A6NKC9 451 aaPredicted RBP13.24□□□□□ -0.29
USHBP1-210ENST00000600286 AP4M1O00189 453 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 SNAPC5O75971 98 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 KRASP01116 189 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 IGLV2-23P01705 113 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 TCRBP04435 133 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 SAA1P0DJI8 122 aaPredicted RBP13.24□□□□□ -0.29
USHBP1-210ENST00000600286 VAMP1P23763 118 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 RAB25P57735 213 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 GNB1P62873 340 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 TMEM267Q0VDI3 215 aaPredicted RBP13.24□□□□□ -0.29
USHBP1-210ENST00000600286 SP6Q3SY56 376 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 SLC25A42Q86VD7 318 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 ZNF695Q8IW36 515 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
USHBP1-210ENST00000600286 RRNAD1Q96FB5 475 aaKnown RBP13.24□□□□□ -0.29
USHBP1-210ENST00000600286 GALNT14Q96FL9 552 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 TP53RKQ96S44 253 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 TMEM222Q9H0R3 208 aa13.24□□□□□ -0.29
USHBP1-210ENST00000600286 MARCH11A6NNE9 402 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 HAX1O00165 279 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 OR5AC1P0C628 307 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 VSIG10L2P0DP72 767 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 UCP1P25874 307 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 MAS1LP35410 378 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 AKR1C2P52895 323 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 SLC35B1P78383 322 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 POU2AF1Q16633 256 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 ZNF585BQ52M93 769 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 H2BFWTQ7Z2G1 175 aa13.23□□□□□ -0.29
USHBP1-210ENST00000600286 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
USHBP1-210ENST00000600286 VKORC1L1Q8N0U8 176 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms