RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 JTBO76095 146 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 IGKV1-13P0DP09 117 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 AADACP22760 399 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 NFYAP23511 347 aaPredicted RBP9.53□□□□□ -0.88
TRIM28-212ENST00000597995 ARL6IP1Q15041 203 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 TATDN3Q17R31 274 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 TMEM177Q53S58 311 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 IDNKQ5T6J7 187 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 LCN12Q6JVE5 192 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 GTSCR1Q86UQ5 136 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 OR5T1Q8NG75 326 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 YIPF6Q96EC8 236 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 DCSTAMPQ9H295 470 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 TUBA4BQ9H853 241 aa9.53□□□□□ -0.88
TRIM28-212ENST00000597995 ANKRD34BA5PLL1 514 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 HLA-DQB1P01920 261 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 LGALS7P47929 136 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 RPL30P62888 115 aaKnown RBP9.52□□□□□ -0.89
TRIM28-212ENST00000597995 EIF4EBP1Q13541 118 aaPredicted RBP9.52□□□□□ -0.89
TRIM28-212ENST00000597995 ZNF343Q6P1L6 599 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 CNIH2Q6PI25 160 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 Q8N402 240 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 GVQW1Q8N7I0 195 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 GRPEL2Q8TAA5 225 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 USMG5Q96IX5 58 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 HARBI1Q96MB7 349 aa9.52□□□□□ -0.89
TRIM28-212ENST00000597995 PEF1Q9UBV8 284 aaKnown RBP9.52□□□□□ -0.89
TRIM28-212ENST00000597995 RBM7Q9Y580 266 aaKnown RBP9.52□□□□□ -0.89
TRIM28-212ENST00000597995 TRAV18A0A075B6X5 111 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 SHOXO15266 292 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 TUSC2O75896 110 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 SCGNO76038 276 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 CNIH1O95406 144 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 CSN3P07498 182 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 PTHLHP12272 177 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 MECP2P51608 486 aaKnown RBP9.51□□□□□ -0.89
TRIM28-212ENST00000597995 SCAND1P57086 179 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 SYNJ2BPP57105 145 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 BRWD1-AS2P59051 145 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 GNG2P59768 71 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 LINC00322Q6ZN03 302 aaPredicted RBP9.51□□□□□ -0.89
TRIM28-212ENST00000597995 OR2K2Q8NGT1 345 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 TINAGL1Q9GZM7 467 aaPredicted RBP9.51□□□□□ -0.89
TRIM28-212ENST00000597995 ANXA10Q9UJ72 324 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 OR2W1Q9Y3N9 320 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 ETV7Q9Y603 341 aa9.51□□□□□ -0.89
TRIM28-212ENST00000597995 CRYZL1O95825 349 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 CTXN2P0C2S0 81 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 RRASP10301 218 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 RPS19P39019 145 aaKnown RBP9.5□□□□□ -0.89
TRIM28-212ENST00000597995 TAGLNQ01995 201 aaKnown RBP9.5□□□□□ -0.89
TRIM28-212ENST00000597995 RTL8BQ17RB0 113 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 IDO2Q6ZQW0 420 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 ZNF645Q8N7E2 425 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 TSPAN14Q8NG11 270 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 ADTRPQ96IZ2 230 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 AUNIPQ9H7T9 357 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 SPATA2Q9UM82 520 aa9.5□□□□□ -0.89
TRIM28-212ENST00000597995 RBMX2Q9Y388 322 aaKnown RBP9.5□□□□□ -0.89
TRIM28-212ENST00000597995 AIREO43918 545 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 RBMXL2O75526 392 aaKnown RBP9.49□□□□□ -0.89
TRIM28-212ENST00000597995 OR2A4O95047 310 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 UBE2KP61086 200 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 LSM3P62310 102 aaKnown RBP9.49□□□□□ -0.89
TRIM28-212ENST00000597995 DEFA5Q01523 94 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 PRSS8Q16651 343 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 RPEL1Q2QD12 228 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 HOGA1Q86XE5 327 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 LAX1Q8IWV1 398 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 TEX45Q8NA69 505 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 BEST4Q8NFU0 473 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 SNAPC3Q92966 411 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 GPHA2Q96T91 129 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 HIPK2Q9H2X6 1198 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 CEPT1Q9Y6K0 416 aa9.49□□□□□ -0.89
TRIM28-212ENST00000597995 A0A087WXM4 84 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 A0A0A6YYH2 397 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 IZUMO1RA6ND01 250 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 A6NJ64 397 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 FCGR3BO75015 233 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 FCER2P06734 321 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 APELAP0DMC3 54 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 DYRK1AQ13627 763 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 ADAM30Q9UKF2 790 aa9.48□□□□□ -0.89
TRIM28-212ENST00000597995 MEIS3P1A6NDR6 274 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 TPPPO94811 219 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 TNFAIP8O95379 198 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 SAA1P0DJI8 122 aaPredicted RBP9.47□□□□□ -0.89
TRIM28-212ENST00000597995 FCGR2CP31995 323 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 CBX3Q13185 183 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 TIMM50Q3ZCQ8 353 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 KCTD9Q7L273 389 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
TRIM28-212ENST00000597995 ADAD2Q8NCV1 583 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms