RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SETXQ7Z333 2677 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 SRRM4A7MD48 611 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 SMLR1H3BR10 107 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 TIMM23O14925 209 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 KRASP01116 189 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 ARHGDIBP52566 201 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 AKR1C2P52895 323 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 KRTAP1-1Q07627 177 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 SSX2Q16385 188 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 Q5BKY6 102 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 GPR157Q5UAW9 335 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 RUSC1-AS1Q66K80 236 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 OR2T35Q8NGX2 323 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 RRNAD1Q96FB5 475 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 COA4Q9NYJ1 87 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 HILPDAQ9Y5L2 63 aa11.86□□□□□ -0.51
SHKBP1-211ENST00000595945 TRAV14DV4A0A0A6YYC5 116 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 IGHV3-72A0A0B4J1Y9 119 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 H7C2Y5 167 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 SMAD7O15105 426 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 VENTXO95231 258 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 HRASP01112 189 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 C1QBP02746 253 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 EBI3Q14213 229 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 SMCO1Q147U7 214 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 IZUMO4Q1ZYL8 232 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 PUSL1Q8N0Z8 303 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 OR4C13Q8NGP0 309 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 FLYWCH2Q96CP2 140 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 RNF5Q99942 180 aa11.85□□□□□ -0.51
SHKBP1-211ENST00000595945 MXRA5Q9NR99 2828 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 IGHV3OR16-10A0A075B7F0 116 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 OR9G9P0C7N8 305 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 PAX6P26367 422 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 LGALS7P47929 136 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 ERVK-16P61578 105 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 THOC7Q6I9Y2 204 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 H2BFWTQ7Z2G1 175 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 VKORC1L1Q8N0U8 176 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 RNASE11Q8TAA1 199 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 PPP1R1CQ8WVI7 109 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 RITA1Q96K30 269 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 RHOVQ96L33 236 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 AIFM2Q9BRQ8 373 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 MS4A7Q9GZW8 240 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 TMEM140Q9NV12 185 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 GSKIPQ9P0R6 139 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 CACNG5Q9UF02 275 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 ITGB1BP2Q9UKP3 347 aa11.84□□□□□ -0.51
SHKBP1-211ENST00000595945 MTORP42345 2549 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 SHOXO15266 292 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 MPC2O95563 127 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 MBPP02686 304 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 CRYGBP07316 175 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 SAA1P0DJI8 122 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 PSMB6P28072 239 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 BPIFB3P59826 476 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 RPS16P62249 146 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 RELBQ01201 579 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 ID3Q02535 119 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 RAB32Q13637 225 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 SSX9Q7RTT3 188 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 THNSL2Q86YJ6 484 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 DMBX1Q8NFW5 382 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 OR11H4Q8NGC9 324 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 MEGF9Q9H1U4 602 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 BET1LQ9NYM9 111 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 CELSR1Q9NYQ6 3014 aa11.83□□□□□ -0.52
SHKBP1-211ENST00000595945 TRAV3A0A0B4J244 114 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 H0YIZ8 118 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 UPK2O00526 184 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 CD5LO43866 347 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 SLC25A4P12235 298 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 LYL1P12980 280 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 DYNLT3P51808 116 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 UBE2KP61086 200 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 FGL1Q08830 312 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 ZFP69Q49AA0 526 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 FBLN7Q53RD9 439 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 C9orf139Q6ZV77 190 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 NOXA1Q86UR1 476 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 FOXRED2Q8IWF2 684 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 Q8N6K4 173 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 OR1S1Q8NH92 325 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 RNF126Q9BV68 326 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 C11orf1Q9H5F2 150 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
SHKBP1-211ENST00000595945 HIVEP1P15822 2718 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 FAM90A26D6RGX4 464 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 K7EPK0 472 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms