RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 NEURL2Q9BR09 285 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 GINS4Q9BRT9 223 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 FAM103A1Q9BTL3 118 aaKnown RBP10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 GAB2Q9UQC2 676 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 DNAH6Q9C0G6 4158 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 H7C2Y5 167 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 M0R1X1 148 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 RRHO14718 337 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 SSX5O60225 188 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 TMEM127O75204 238 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 RBBP9O75884 186 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 IGKV1-16P04430 117 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 TFAP2AP05549 437 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 CSN3P07498 182 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 GNG2P59768 71 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 H1FOOQ8IZA3 346 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 ABHD5Q8WTS1 349 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 OVOL2Q9BRP0 275 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 DCSTAMPQ9H295 470 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 FBXL15Q9H469 300 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 SRD5A3Q9H8P0 318 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 RANGRFQ9HD47 186 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 SDHAF2Q9NX18 166 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 SIGLEC8Q9NYZ4 499 aa10.37□□□□□ -0.75
SHKBP1-208ENST00000595726 ARPC1BO15143 372 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 APOA2P02652 100 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 TRGV3P03979 118 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 CRIP2P52943 208 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 LSM3P62310 102 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 DYRK1AQ13627 763 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 ACTBL2Q562R1 376 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 UNQ5815/PRO19632Q6UWF5 114 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 PDPNQ86YL7 162 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 Q8N402 240 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 RNF5Q99942 180 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 SPATA2Q9UM82 520 aa10.36□□□□□ -0.75
SHKBP1-208ENST00000595726 HERC1Q15751 4861 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PKD1P98161 4303 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 A0A0A6YYH2 397 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 A0A0J9YWU9 116 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 A6NJ64 397 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 ZP3P21754 424 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 RPS19P39019 145 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PRR20EP86478 221 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PRR20CP86479 221 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PRR20DP86480 221 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PRR20BP86481 221 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PRR20AP86496 221 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PLGLAQ15195 96 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 ZNF660Q6AZW8 331 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 PPP1R27Q86WC6 154 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 CROCCP3Q8IVE0 287 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 LFNGQ8NES3 379 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 SLC35D1Q9NTN3 355 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 RBM7Q9Y580 266 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 MUC4Q99102 2169 aa10.35□□□□□ -0.75
SHKBP1-208ENST00000595726 TRAV18A0A075B6X5 111 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 SPDEFO95238 335 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 CTXN2P0C2S0 81 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 SMIM18P0DKX4 95 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 MECP2P51608 486 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 TMEM267Q0VDI3 215 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 PSG5Q15238 335 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 LGALS9CQ6DKI2 356 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 PYHIN1Q6K0P9 492 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 CNIH2Q6PI25 160 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 OR13F1Q8NGS4 319 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 CLCC1Q96S66 551 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 FUNDC2Q9BWH2 189 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 METTL1Q9UBP6 276 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 ANXA10Q9UJ72 324 aa10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 KLK5Q9Y337 293 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-208ENST00000595726 TRBV12-3P01733 135 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 NFYAP23511 347 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 NCS1P62166 190 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 RPS16P62249 146 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 DEFA5Q01523 94 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 CD300EQ496F6 205 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 UBE2NLQ5JXB2 153 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 GVQW1Q8N7I0 195 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 SLC25A46Q96AG3 418 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 TSNAXQ99598 290 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 AUNIPQ9H7T9 357 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 DIABLOQ9NR28 239 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 ZNF355PQ9NSJ1 428 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 OR2W1Q9Y3N9 320 aa10.33□□□□□ -0.76
SHKBP1-208ENST00000595726 C13orf42A0A1B0GVH6 325 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 LINC00473A8K010 186 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 J3QRK9 145 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 CA2P00918 260 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 IGLV2-23P01705 113 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 HLA-DQB1P01920 261 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 PTHLHP12272 177 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms