RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 PI3P19957 117 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 PPIFP30405 207 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 PPP5CP53041 499 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 SSBP1Q04837 148 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 CATR1Q13166 79 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 FXYD3Q14802 87 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 C19orf54Q5BKX5 351 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 SSX9Q7RTT3 188 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 CCDC190Q86UF4 302 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 LHFPL1Q86WI0 220 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 OR4C16Q8NGL9 310 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 CASTOR1Q8WTX7 329 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 ARPC1AQ92747 370 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 R3HDM4Q96D70 268 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 RSRP1Q9BUV0 290 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 NDUFA13Q9P0J0 144 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 RABL2AQ9UBK7 228 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 ZNF580Q9UK33 172 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 RABL2BQ9UNT1 228 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 TSSC4Q9Y5U2 329 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 TRRAPQ9Y4A5 3859 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 A0A1W2PN81 502 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 SOX15O60248 233 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 CNIH1O95406 144 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 IGHG4P01861 327 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 OPN1MWP04001 364 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 APELAP0DMC3 54 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 OPN1MW2P0DN77 364 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 OPN1MW3P0DN78 364 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 RPA2P15927 270 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 TBPP20226 339 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 CHRNA7P36544 502 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 KIR2DS2P43631 304 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 RPL23AP62750 156 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 PRSS8Q16651 343 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 SCGB2B2Q4G0G5 96 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 PYDC2Q56P42 97 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 TEX38Q6PEX7 206 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 UNQ5815/PRO19632Q6UWF5 114 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 ZNF562Q6V9R5 426 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 ARRDC1Q8N5I2 433 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 TEX45Q8NA69 505 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 OR6Q1Q8NGQ2 317 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 MRGPRFQ96AM1 343 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 GON7Q9BXV9 100 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 ZNF430Q9H8G1 570 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 NUBP2Q9Y5Y2 271 aa10.78□□□□□ -0.68
SHKBP1-207ENST00000595631 ANKRD20A5PA0PJZ0 165 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 S1PR2O95136 353 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 AKAIN1P0CW23 69 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 PGAM2P15259 253 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 PSMB8P28062 276 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 CRIP2P52943 208 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 UCP3P55916 312 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 FOXE3Q13461 319 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 TNXAQ16473 311 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 CXorf66Q5JRM2 361 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 C10orf55Q5SWW7 151 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 CMTM1Q8IZ96 169 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 SLC38A6Q8IZM9 456 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 PUSL1Q8N0Z8 303 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 COMMD1Q8N668 190 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 MINDY2Q8NBR6 621 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 BORCS5Q969J3 196 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 TRIM63Q969Q1 353 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 THAP7Q9BT49 309 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 BATF3Q9NR55 127 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 CMYA5Q8N3K9 4069 aa10.77□□□□□ -0.69
SHKBP1-207ENST00000595631 NUDT19A8MXV4 375 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 RBFOX2O43251 390 aaKnown RBP eCLIP10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 PF4V1P10720 104 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 MYOD1P15172 320 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 LPAR6P43657 344 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 OR4A47Q6IF82 309 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 C8orf86Q6ZUL3 223 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 TBC1D26Q86UD7 250 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 RNF152Q8N8N0 203 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 KLHL30-AS1Q8NEE0 82 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 OR13C8Q8NGS7 320 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 MARCH1Q8TCQ1 289 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 RHOVQ96L33 236 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 SLC2A9Q9NRM0 540 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 FOXA2Q9Y261 457 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 VWFP04275 2813 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 PKD1L1Q8TDX9 2849 aa10.76□□□□□ -0.69
SHKBP1-207ENST00000595631 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 A6NHS1 94 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 KBTBD11O94819 623 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 OR2A4O95047 310 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 HPRT1P00492 218 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 HRASP01112 189 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 ELANEP08246 267 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 F2RP25116 425 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 KIAA0141Q14154 515 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 MEF2DQ14814 521 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 DEFB136Q30KP8 78 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms