RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CLCF1Q9UBD9 225 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 CHRNA7P36544 502 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 SOX8P57073 446 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 EDDM3AQ14507 147 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 TEX38Q6PEX7 206 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 ATG101Q9BSB4 218 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 SNHG12Q9BXW3 62 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 PRR14LQ5THK1 2151 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 MARCH11A6NNE9 402 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 IL3RAP26951 378 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 RPL15P61313 204 aaKnown RBP13.73□□□□□ -0.21
LIG1-206ENST00000594067 LCN2P80188 198 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 GCSAMLQ5JQS6 135 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 VWA1Q6PCB0 445 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 OR9G9P0C7N8 305 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 HOXC12P31275 282 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 WDR31Q8NA23 367 aa13.73□□□□□ -0.21
LIG1-206ENST00000594067 C15orf62A8K5M9 175 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 C11orf94C9JXX5 98 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 SP9P0CG40 484 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 EGR1P18146 543 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 CDC34P49427 236 aaPredicted RBP13.72□□□□□ -0.21
LIG1-206ENST00000594067 FOXF2Q12947 444 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 VWC2Q2TAL6 325 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 FAM78BQ5VT40 261 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 KCNIP4Q6PIL6 250 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 LINC01551Q86U37 167 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 PRR7Q8TB68 274 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 R3HDM4Q96D70 268 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 CRYAAP02489 173 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 TNFSF10P50591 281 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 HSD17B10Q99714 261 aaKnown RBP13.72□□□□□ -0.21
LIG1-206ENST00000594067 FAM234AQ9H0X4 552 aa13.72□□□□□ -0.21
LIG1-206ENST00000594067 TRAV38-1A0A0B4J264 116 aa13.71□□□□□ -0.21
LIG1-206ENST00000594067 C17orf112F2Z3M2 114 aa13.71□□□□□ -0.21
LIG1-206ENST00000594067 IGKV3-15P01624 115 aa13.71□□□□□ -0.21
LIG1-206ENST00000594067 ERVFC1-1P60608 527 aa13.71□□□□□ -0.21
LIG1-206ENST00000594067 TMEM144Q7Z5S9 345 aa13.71□□□□□ -0.21
LIG1-206ENST00000594067 CD177Q8N6Q3 437 aa13.71□□□□□ -0.21
LIG1-206ENST00000594067 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.21
LIG1-206ENST00000594067 FKBP11Q9NYL4 201 aa13.71□□□□□ -0.21
LIG1-206ENST00000594067 A0A1B0GUS0 222 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 FCGR3BO75015 233 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 IGHV3-13P01766 116 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 IGHV3-7P01780 117 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 CECR9P0C854 216 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 UBE2G2P60604 165 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 TMEM256Q8N2U0 113 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 TCTEX1D1Q8N7M0 179 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 Q8N7P7 452 aa13.71□□□□□ -0.22
LIG1-206ENST00000594067 SPINT2O43291 252 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 NUPR1O60356 82 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 PROP1O75360 226 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 KIR2DL2P43627 348 aaPredicted RBP13.7□□□□□ -0.22
LIG1-206ENST00000594067 EDDM3BP56851 147 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 GNB1P62873 340 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 SMIM21Q3B7S5 101 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 TRAPPC1Q9Y5R8 145 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 PXMP4Q9Y6I8 212 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 A0A0U1RQK1 487 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 ZNF320A2RRD8 509 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 C15orf65H3BRN8 121 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 SCGB1D1O95968 90 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 C1orf194Q5T5A4 169 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 C9orf106Q8NAJ2 232 aa13.7□□□□□ -0.22
LIG1-206ENST00000594067 POLR3KQ9Y2Y1 108 aaPredicted RBP13.7□□□□□ -0.22
LIG1-206ENST00000594067 TMPRSS2O15393 492 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 CD99P14209 185 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 CD1BP29016 333 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 GPR12P47775 334 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 VKORC1L1Q8N0U8 176 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 DERL1Q9BUN8 251 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 GCH1P30793 250 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 DUTP33316 252 aaKnown RBP13.69□□□□□ -0.22
LIG1-206ENST00000594067 ATP5G3P48201 142 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 CCL11P51671 97 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 SRSF6Q13247 344 aaKnown RBP13.69□□□□□ -0.22
LIG1-206ENST00000594067 DEFB123Q8N688 67 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 PATZ1Q9HBE1 687 aaKnown RBP13.69□□□□□ -0.22
LIG1-206ENST00000594067 GNG12Q9UBI6 72 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 WDR83OSQ9Y284 106 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 LOC400499M0QZD8 3231 aa13.69□□□□□ -0.22
LIG1-206ENST00000594067 ZNF891A8MT65 544 aaPredicted RBP13.68□□□□□ -0.22
LIG1-206ENST00000594067 C1QTNF9P0C862 333 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 KITLGP21583 273 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 PRDX2P32119 198 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 FOXL1Q12952 345 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 PLA2G2CQ5R387 149 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 PRAMEF5Q5TYX0 476 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 CST9LP1Q5W188 147 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 ZNF114Q8NC26 417 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 IMMP2LQ96T52 175 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 NBEAQ8NFP9 2946 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 KIR2DL5BA0A0G2JN68 375 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 KIR2DL5BA0A0G2JPC4 375 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 NDUFB4O95168 129 aa13.68□□□□□ -0.22
LIG1-206ENST00000594067 CD82P27701 267 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms