RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 TSPAN9O75954 239 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 ATG12O94817 140 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 IGKV1-39P01597 117 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 IGKV1D-39P04432 117 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 IGHV1-8P0DP01 117 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 ID3Q02535 119 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 BTNL8Q6UX41 500 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 SLC25A48Q6ZT89 311 aaKnown RBP10.81□□□□□ -0.68
VRK3-205ENST00000593919 LY6G5BQ8NDX9 201 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 CLDND2Q8NHS1 167 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 TSNAXQ99598 290 aaKnown RBP10.81□□□□□ -0.68
VRK3-205ENST00000593919 PIMREGQ9BSJ6 248 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 SLC25A31Q9H0C2 315 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 LYRM2Q9NU23 88 aaPredicted RBP10.81□□□□□ -0.68
VRK3-205ENST00000593919 LIN7CQ9NUP9 197 aaKnown RBP10.81□□□□□ -0.68
VRK3-205ENST00000593919 ZNRD1Q9P1U0 126 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 A0A1W2PPH5 198 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 LIPFP07098 398 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 SEC11BP0C7V7 166 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 SPP1P10451 314 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 PAX1P15863 534 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 RPL30P62888 115 aaKnown RBP10.8□□□□□ -0.68
VRK3-205ENST00000593919 RPL39P5Q59GN2 51 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 CLEC2AQ6UVW9 174 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 TMEM252Q8N6L7 170 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 C10orf105Q8TEF2 133 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 RAB39BQ96DA2 213 aa10.8□□□□□ -0.68
VRK3-205ENST00000593919 NKX6-2Q9C056 277 aaPredicted RBP10.8□□□□□ -0.68
VRK3-205ENST00000593919 LOC105371242A0A075B767 164 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 SAA2-SAA4A0A096LPE2 208 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 KIAA1324LA8MWY0 1029 aaPredicted RBP10.79□□□□□ -0.68
VRK3-205ENST00000593919 PITX3O75364 302 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 CST7O76096 145 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 TMEM50AO95807 157 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 SAA2P0DJI9 122 aaPredicted RBP10.79□□□□□ -0.68
VRK3-205ENST00000593919 F2RL1P55085 397 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 DLX1P56177 255 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 LINC00205P59089 165 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 LMO4P61968 165 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 CTAG1AP78358 180 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 ZNF616Q08AN1 781 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 HIST2H2BCQ6DN03 193 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
VRK3-205ENST00000593919 ODF3L1Q8IXM7 274 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 ONECUT1Q9UBC0 465 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 CACNG5Q9UF02 275 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 A0A087X0M5 115 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 A0A1B0GU03 582 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 A0A1B0GX30 115 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 LINC00473A8K010 186 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 RNF212BA8MTL3 300 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 NDUFS8O00217 210 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 RAB29O14966 203 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 ZFP36P26651 326 aaKnown RBP10.79□□□□□ -0.68
VRK3-205ENST00000593919 CAMLGP49069 296 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 DYNLT3P51808 116 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 BPIFB3P59826 476 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 GUCA2BQ16661 112 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 TMEM182Q6ZP80 229 aaPredicted RBP10.79□□□□□ -0.68
VRK3-205ENST00000593919 LYG1Q8N1E2 194 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 TMEM217Q8N7C4 229 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 OR5C1Q8NGR4 320 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 HSD17B10Q99714 261 aaKnown RBP10.79□□□□□ -0.68
VRK3-205ENST00000593919 UQCC1Q9NVA1 299 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 RFNGQ9Y644 331 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 ITPR2Q14571 2701 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 CELSR1Q9NYQ6 3014 aa10.79□□□□□ -0.68
VRK3-205ENST00000593919 IGHV4-30-2A0A087WSY4 118 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 PIGBOS1A0A0B4J2F0 54 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 H3BP45 60 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 IGKV1-5P01602 117 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 RBP4P02753 201 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 PRH1P02810 166 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 MMP9P14780 707 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 DUTP33316 252 aaKnown RBP10.78□□□□□ -0.68
VRK3-205ENST00000593919 FHITP49789 147 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 CATR1Q13166 79 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 ZNF266Q14584 549 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 MIDNQ504T8 468 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 ZNF585BQ52M93 769 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 OR2B11Q5JQS5 317 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 Q6ZRM9 215 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 TCTEX1D2Q8WW35 142 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 TMEM133Q9H2Q1 129 aa10.78□□□□□ -0.68
VRK3-205ENST00000593919 FAM74A7A6NL05 159 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 VWC2LB2RUY7 222 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 RNASEK-C17orf49H0YIS7 233 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 M0R1X1 148 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 DNASE2O00115 360 aaPredicted RBP10.77□□□□□ -0.68
VRK3-205ENST00000593919 RAMP3O60896 148 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 TSPAN15O95858 294 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 SLC25A6P12236 298 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 PAX9P55771 341 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 LCN2P80188 198 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 PUSL1Q8N0Z8 303 aaKnown RBP10.77□□□□□ -0.68
VRK3-205ENST00000593919 SVBPQ8N300 66 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.77□□□□□ -0.68
VRK3-205ENST00000593919 LSM10Q969L4 123 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms