RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SYNJ2BPP57105 145 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 DEFA5Q01523 94 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 TIMM50Q3ZCQ8 353 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 IDNKQ5T6J7 187 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 LCN12Q6JVE5 192 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 SLC35D1Q9NTN3 355 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
PNKP-202ENST00000593706 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 AIREO43918 545 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 AADACP22760 399 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 LGALS7P47929 136 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 CBX3Q13185 183 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 HAGHQ16775 308 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 MRGPRG-AS1Q2M3A8 158 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 TMEM177Q53S58 311 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 GINS4Q9BRT9 223 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 ST6GALNAC5Q9BVH7 336 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 COA4Q9NYJ1 87 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 ANXA10Q9UJ72 324 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 SPATA2Q9UM82 520 aa11.24□□□□□ -0.61
PNKP-202ENST00000593706 IGKV1D-13A0A0B4J2D9 117 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 SRRM4A7MD48 611 aaKnown RBP11.23□□□□□ -0.61
PNKP-202ENST00000593706 LINC00473A8K010 186 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 TUSC2O75896 110 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 JTBO76095 146 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 HLA-DQB1P01920 261 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 IGKV1-13P0DP09 117 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
PNKP-202ENST00000593706 RPS19P39019 145 aaKnown RBP11.23□□□□□ -0.61
PNKP-202ENST00000593706 GNG2P59768 71 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 EIF4EBP1Q13541 118 aaPredicted RBP11.23□□□□□ -0.61
PNKP-202ENST00000593706 KLF5Q13887 457 aaPredicted RBP11.23□□□□□ -0.61
PNKP-202ENST00000593706 TATDN3Q17R31 274 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 RPEL1Q2QD12 228 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 PHB2Q99623 299 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
PNKP-202ENST00000593706 OR2W1Q9Y3N9 320 aa11.23□□□□□ -0.61
PNKP-202ENST00000593706 TRAV18A0A075B6X5 111 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 CTXN2P0C2S0 81 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 SMIM18P0DKX4 95 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 APELAP0DMC3 54 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 NFYAP23511 347 aaPredicted RBP11.22□□□□□ -0.61
PNKP-202ENST00000593706 TAGLNQ01995 201 aaKnown RBP11.22□□□□□ -0.61
PNKP-202ENST00000593706 PJVKQ0ZLH3 352 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 Q8N402 240 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 BVESQ8NE79 360 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 SNAPC3Q92966 411 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
PNKP-202ENST00000593706 VCX3AQ9NNX9 186 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
PNKP-202ENST00000593706 SHOXO15266 292 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 HOGA1Q86XE5 327 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 CROCCP3Q8IVE0 287 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 GVQW1Q8N7I0 195 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 OR13F1Q8NGS4 319 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 SLC25A46Q96AG3 418 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 ADTRPQ96IZ2 230 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 TMEM68Q96MH6 324 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 RETNQ9HD89 108 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 PEMTQ9UBM1 199 aa11.21□□□□□ -0.61
PNKP-202ENST00000593706 IZUMO1RA6ND01 250 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 MPPED1O15442 326 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 OR2A4O95047 310 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 TRBV12-3P01733 135 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 CSN3P07498 182 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 PTHLHP12272 177 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 LSM3P62310 102 aaKnown RBP11.2□□□□□ -0.62
PNKP-202ENST00000593706 RPL30P62888 115 aaKnown RBP11.2□□□□□ -0.62
PNKP-202ENST00000593706 DYRK1AQ13627 763 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 RTL8BQ17RB0 113 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 IL34Q6ZMJ4 242 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 BEST4Q8NFU0 473 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 USMG5Q96IX5 58 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 FAM110AQ9BQ89 295 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 THAP7Q9BT49 309 aaPredicted RBP11.2□□□□□ -0.62
PNKP-202ENST00000593706 FUNDC2Q9BWH2 189 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 PLEKHA3Q9HB20 300 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 RBMX2Q9Y388 322 aaKnown RBP11.2□□□□□ -0.62
PNKP-202ENST00000593706 CEPT1Q9Y6K0 416 aa11.2□□□□□ -0.62
PNKP-202ENST00000593706 XRCC3O43542 346 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 RRASP10301 218 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 BRWD1-AS2P59051 145 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 CD81P60033 236 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 UBE2KP61086 200 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 NCS1P62166 190 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 UBE2NLQ5JXB2 153 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
PNKP-202ENST00000593706 RBM7Q9Y580 266 aaKnown RBP11.19□□□□□ -0.62
PNKP-202ENST00000593706 SLC22A5O76082 557 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 TPPPO94811 219 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 BRI3O95415 125 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 CRYZL1O95825 349 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 EXOSC2Q13868 293 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms