RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 OR13C8Q8NGS7 320 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 CHPT1Q8WUD6 406 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 MRGPRFQ96AM1 343 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 NOL4LQ96MY1 436 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-221ENST00000593026 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 SDHCQ99643 169 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-221ENST00000593026 OR51J1Q9H342 316 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 HRASLSQ9HDD0 168 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 LINC00527Q9UJ94 153 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 PSMB11A5LHX3 300 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 FCN1O00602 326 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 CA2P00918 260 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 HRASP01112 189 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 CRYGBP07316 175 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 SAA1P0DJI8 122 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-221ENST00000593026 F2RP25116 425 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 PIGPP57054 158 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 RND3P61587 244 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 CX3CL1P78423 397 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 STPG2Q8N412 459 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 S100ZQ8WXG8 99 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 CITED1Q99966 193 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 PARP11Q9NR21 331 aa11.78□□□□□ -0.52
DDX39A-221ENST00000593026 C14orf166Q9Y224 244 aaKnown RBP11.78□□□□□ -0.52
DDX39A-221ENST00000593026 FBN3Q75N90 2809 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 ATP6V0E1O15342 81 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 MPPED1O15442 326 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 HPRT1P00492 218 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 IGF1P05019 195 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 CTSDP07339 412 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-221ENST00000593026 IL7P13232 177 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 ZNF562Q6V9R5 426 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 VKORC1L1Q8N0U8 176 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 C11orf44Q8N8P7 122 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 CCDC71LQ8N9Z2 235 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 OR5AU1Q8NGC0 362 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 VSTM2AQ8TAG5 236 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 WIPF2Q8TF74 440 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-221ENST00000593026 ABHD5Q8WTS1 349 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 RHOVQ96L33 236 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 AIFM2Q9BRQ8 373 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 COPZ2Q9P299 210 aa11.77□□□□□ -0.53
DDX39A-221ENST00000593026 CREBL2O60519 120 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-221ENST00000593026 FBXO24O75426 580 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 S1PR2O95136 353 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 VDAC1P21796 283 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 TAS2R31P59538 309 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 GNB1P62873 340 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 SLC35B1P78383 322 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 NDPQ00604 133 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 PRSS8Q16651 343 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 SSX9Q7RTT3 188 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 OR4X2Q8NGF9 303 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 SCGB3A2Q96PL1 93 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-221ENST00000593026 ZNF580Q9UK33 172 aa11.76□□□□□ -0.53
DDX39A-221ENST00000593026 LINC00854A0A1B0GVQ3 168 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 KBTBD11O94819 623 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 OR2A4O95047 310 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 CNIH1O95406 144 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 NQO2P16083 231 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 LPAR6P43657 344 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 ERVK-16P61578 105 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 FXYD3Q14802 87 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
DDX39A-221ENST00000593026 GRPEL2Q8TAA5 225 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 ARPC1AQ92747 370 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 OR2A7Q96R45 310 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 RTBDNQ9BSG5 229 aaPredicted RBP11.75□□□□□ -0.53
DDX39A-221ENST00000593026 CCDC32Q9BV29 185 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 C5orf66Q9H5L9 145 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 ZNF430Q9H8G1 570 aaPredicted RBP11.75□□□□□ -0.53
DDX39A-221ENST00000593026 GPR132Q9UNW8 380 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 FBXO7Q9Y3I1 522 aa11.75□□□□□ -0.53
DDX39A-221ENST00000593026 TRAV41A0A0B4J266 112 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 C3orf85A0A1B0GTC6 90 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 NAP1L6A6NFF2 107 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 CENPXA8MT69 81 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 H0Y980 276 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 ACTL6BO94805 426 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 SERPINE2P07093 398 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 CD28P10747 220 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 CD40LGP29965 261 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 CRIP2P52943 208 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-221ENST00000593026 ZNF846Q147U1 533 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 TNXAQ16473 311 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 POU2AF1Q16633 256 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 ECSCRQ19T08 205 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 MRGPRG-AS1Q2M3A8 158 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 OR4A47Q6IF82 309 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 MMD2Q8IY49 270 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms