RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 MINDY2Q8NBR6 621 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 ISOC1Q96CN7 298 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 OR5B12Q96R08 314 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 CCDC59Q9P031 241 aaKnown RBP10.86□□□□□ -0.67
CLIP3-205ENST00000592017 ADAM30Q9UKF2 790 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 SULT1C2O00338 296 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 CTDSP2O14595 271 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 SOX15O60248 233 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 IGLV1-40P01703 118 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 SLC6A1P30531 599 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 CDX1P47902 265 aaPredicted RBP10.85□□□□□ -0.67
CLIP3-205ENST00000592017 TSPAN5P62079 268 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 CATR1Q13166 79 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 MSMO1Q15800 293 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 TNXAQ16473 311 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 C19orf54Q5BKX5 351 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 AADACL3Q5VUY0 350 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 LYSMD2Q8IV50 215 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 VKORC1L1Q8N0U8 176 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 TCTEX1D1Q8N7M0 179 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 TEX45Q8NA69 505 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 OR51H1Q8NH63 302 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 DYNC2LI1Q8TCX1 351 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 MRAPQ8TCY5 172 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 C4orf3Q8WVX3 66 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 MOB3AQ96BX8 217 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
CLIP3-205ENST00000592017 P2RX4Q99571 388 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 PHB2Q99623 299 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 C6orf62Q9GZU0 229 aaPredicted RBP10.85□□□□□ -0.67
CLIP3-205ENST00000592017 FXYD6Q9H0Q3 95 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 MIXL1Q9H2W2 232 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 GNB4Q9HAV0 340 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 NUBP2Q9Y5Y2 271 aa10.85□□□□□ -0.67
CLIP3-205ENST00000592017 DNAH9Q9NYC9 4486 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 M0QYG6 137 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 CCL24O00175 119 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 APELAP0DMC3 54 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 MYCNOSP40205 109 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 KIR2DS2P43631 304 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 RAB9AP51151 201 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 SSBP2P81877 361 aaPredicted RBP10.84□□□□□ -0.67
CLIP3-205ENST00000592017 PRSS8Q16651 343 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 SPAG16Q8N0X2 631 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 ZBTB34Q8NCN2 500 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 OR5M8Q8NGP6 311 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 OR6F1Q8NGZ6 308 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 OR52I2Q8NH67 350 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 RAX2Q96IS3 184 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 MS4A10Q96PG2 267 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 VSIG4Q9Y279 399 aa10.84□□□□□ -0.67
CLIP3-205ENST00000592017 CREBL2O60519 120 aaPredicted RBP10.83□□□□□ -0.68
CLIP3-205ENST00000592017 RAMP3O60896 148 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 ACTL6BO94805 426 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 RLN1P04808 185 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 CD40LGP29965 261 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
CLIP3-205ENST00000592017 TPPP2P59282 170 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 AKIRIN2Q53H80 203 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 PYHIN1Q6K0P9 492 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 DHRS11Q6UWP2 260 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 ZNF491Q8N8L2 437 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 OR5T1Q8NG75 326 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 MYOZ3Q8TDC0 251 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 BORCS5Q969J3 196 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 ABHD1Q96SE0 405 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 ZNF430Q9H8G1 570 aaPredicted RBP10.83□□□□□ -0.68
CLIP3-205ENST00000592017 KLK11Q9UBX7 282 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 CEPT1Q9Y6K0 416 aa10.83□□□□□ -0.68
CLIP3-205ENST00000592017 K7EIL1 84 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 MPPED1O15442 326 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 DUS4LO95620 317 aaKnown RBP10.82□□□□□ -0.68
CLIP3-205ENST00000592017 GNRHRP30968 328 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 BRWD1-AS2P59051 145 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 DGCR2P98153 550 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 IL18Q14116 193 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 MRGPRG-AS1Q2M3A8 158 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 C10orf55Q5SWW7 151 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 POC5Q8NA72 575 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 C15orf40Q8WUR7 153 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 FCAMRQ8WWV6 532 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 SRSF12Q8WXF0 261 aaKnown RBP10.82□□□□□ -0.68
CLIP3-205ENST00000592017 DIRAS2Q96HU8 199 aa10.82□□□□□ -0.68
CLIP3-205ENST00000592017 ALX4Q9H161 411 aaPredicted RBP10.82□□□□□ -0.68
CLIP3-205ENST00000592017 WI2-2373I1.2A0A1W2PRP0 233 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 MSGN1A6NI15 193 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 KBTBD11O94819 623 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 OR2A4O95047 310 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 HRASP01112 189 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 IGHV3-11P01762 117 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 TRGV3P03979 118 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 IFNA6P05013 189 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 DEFA5Q01523 94 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 EGFEM1PQ0D2K5 195 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 KIAA0141Q14154 515 aaPredicted RBP10.81□□□□□ -0.68
CLIP3-205ENST00000592017 PHLDA2Q53GA4 152 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms