RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TRAV38-1A0A0B4J264 116 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 PAX6P26367 422 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 ELLP55199 621 aaPredicted RBP16.21■□□□□ 0.19
MBD3-209ENST00000592012 MRPS11P82912 194 aaKnown RBP16.21■□□□□ 0.19
MBD3-209ENST00000592012 PDLIM3Q53GG5 364 aaPredicted RBP16.21■□□□□ 0.19
MBD3-209ENST00000592012 LYG1Q8N1E2 194 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 OR4S2Q8NH73 311 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 NGBQ9NPG2 151 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 hADV38S2A0JD32 116 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 VSTM5A8MXK1 200 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 SHISA9B4DS77 424 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 NDUFB7P17568 137 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 HNF4GQ14541 408 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 ZNF787Q6DD87 383 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 RPP25LQ8N5L8 163 aaKnown RBP16.21■□□□□ 0.19
MBD3-209ENST00000592012 EGLN1Q9GZT9 426 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 TMEM140Q9NV12 185 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 GNG13Q9P2W3 67 aa16.21■□□□□ 0.19
MBD3-209ENST00000592012 RPUSD1Q9UJJ7 312 aaKnown RBP16.21■□□□□ 0.19
MBD3-209ENST00000592012 LOC102723971A0A1B0GUV8 181 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 TMEM178BH3BS89 294 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 IGKV1D-33P01593 117 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 IGKV1-33P01594 117 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 CYB561D1Q8N8Q1 229 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 ZNF383Q8NA42 475 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 RNASE6Q93091 150 aaKnown RBP16.2■□□□□ 0.18
MBD3-209ENST00000592012 SLC25A10Q9UBX3 287 aaPredicted RBP16.2■□□□□ 0.18
MBD3-209ENST00000592012 PUS1Q9Y606 427 aaKnown RBP eCLIP16.2■□□□□ 0.18
MBD3-209ENST00000592012 LINC00312Q9Y6C7 94 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 ARFGEF3Q5TH69 2177 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 NKX6-3A6NJ46 265 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 LY86O95711 162 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 DAOP14920 347 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 MDKP21741 143 aaPredicted RBP16.2■□□□□ 0.18
MBD3-209ENST00000592012 THBS3P49746 956 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 FGF8P55075 233 aaPredicted RBP16.2■□□□□ 0.18
MBD3-209ENST00000592012 FLI1Q01543 452 aaPredicted RBP16.2■□□□□ 0.18
MBD3-209ENST00000592012 RHEBQ15382 184 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 TMEM30BQ3MIR4 351 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 ACSM6Q6P461 480 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 DMRTC2Q8IXT2 367 aaPredicted RBP16.2■□□□□ 0.18
MBD3-209ENST00000592012 C15orf54Q8N8G6 183 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 TUBA4BQ9H853 241 aa16.2■□□□□ 0.18
MBD3-209ENST00000592012 E7EQL1 145 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 FCN3O75636 299 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 ARG1P05089 322 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 CRYBA1P05813 215 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 CTRB1P17538 263 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 FGF7P21781 194 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 GNG10P50151 68 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 NCMAPQ5T1S8 102 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 CTRB2Q6GPI1 263 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 SLC25A48Q6ZT89 311 aaKnown RBP16.19■□□□□ 0.18
MBD3-209ENST00000592012 ZNF429Q86V71 674 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 C1orf87Q8N0U7 546 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 MLXQ9UH92 298 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 PPIAL4EA0A075B759 164 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 TRGV8A0A0C4DH27 118 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 PPIAL4DF5H284 164 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 PPIAL4FP0DN26 164 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 VDAC2P45880 294 aaPredicted RBP16.19■□□□□ 0.18
MBD3-209ENST00000592012 ERVFRD-1P60508 538 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 CCL17Q92583 94 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 RHOVQ96L33 236 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 PPIAL4AQ9Y536 164 aa16.19■□□□□ 0.18
MBD3-209ENST00000592012 CEBPGP53567 150 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 TFF3Q07654 80 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 ZCCHC14Q8WYQ9 949 aaKnown RBP16.18■□□□□ 0.18
MBD3-209ENST00000592012 NEUROG1Q92886 237 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 ADTRPQ96IZ2 230 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 NPCDR1Q9BY65 106 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 CISD1Q9NZ45 108 aaKnown RBP16.18■□□□□ 0.18
MBD3-209ENST00000592012 SPTBN4Q9H254 2564 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 ZZEF1O43149 2961 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 ZFP92A6NM28 416 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 H3BQ15 152 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 BCL2P10415 239 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 PLA2G5P39877 138 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 RPL31P62899 125 aaKnown RBP16.18■□□□□ 0.18
MBD3-209ENST00000592012 MEF2CQ06413 473 aaPredicted RBP16.18■□□□□ 0.18
MBD3-209ENST00000592012 OR10G4Q8NGN3 311 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 TMEM106BQ9NUM4 274 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 RAXQ9Y2V3 346 aa16.18■□□□□ 0.18
MBD3-209ENST00000592012 MAP1LC3B2A6NCE7 125 aa16.17■□□□□ 0.18
MBD3-209ENST00000592012 TNFRSF13BO14836 293 aaPredicted RBP16.17■□□□□ 0.18
MBD3-209ENST00000592012 MAP1LC3BQ9GZQ8 125 aa16.17■□□□□ 0.18
MBD3-209ENST00000592012 SLC39A9Q9NUM3 307 aa16.17■□□□□ 0.18
MBD3-209ENST00000592012 EIF3GO75821 320 aaKnown RBP eCLIP16.16■□□□□ 0.18
MBD3-209ENST00000592012 AVPI1Q5T686 147 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 OR4A47Q6IF82 309 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 ISOC2Q96AB3 205 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 HEYLQ9NQ87 328 aaPredicted RBP16.16■□□□□ 0.18
MBD3-209ENST00000592012 TNCP24821 2201 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 C15orf61A6NNL5 157 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 IFNA10P01566 189 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 CT45A6P0DMU7 189 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 CT45A5P0DMU8 189 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 CT45A7P0DMV0 189 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 RPP30P78346 268 aaKnown RBP16.16■□□□□ 0.18
MBD3-209ENST00000592012 OR10A7Q8NGE5 316 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms