RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 VSTM2AQ8TAG5 236 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 FAM213BQ8TBF2 198 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 TAF15Q92804 592 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS25-206ENST00000591584 RHOVQ96L33 236 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 OR4C12Q96R67 309 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 QTRT1Q9BXR0 403 aaKnown RBP8.52□□□□□ -1.05
VPS25-206ENST00000591584 SH3BGRL3Q9H299 93 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 ENY2Q9NPA8 101 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 BET1LQ9NYM9 111 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 KIAA1456Q9P272 454 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 CACNA1DQ01668 2161 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
VPS25-206ENST00000591584 FNDC10F2Z333 226 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 UPK2O00526 184 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 SIAH2O43255 324 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 NDUFS6O75380 124 aaKnown RBP8.51□□□□□ -1.05
VPS25-206ENST00000591584 COL8A2P25067 703 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
VPS25-206ENST00000591584 GNG10P50151 68 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 RAB13P51153 203 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 OR2B8PP59922 312 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 DEFA5Q01523 94 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 ARL16Q0P5N6 197 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 LYPD2Q6UXB3 125 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 DTX2Q86UW9 622 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 PDPNQ86YL7 162 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 OR8B3Q8NGG8 313 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 OR5AN1Q8NGI8 311 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 OR13D1Q8NGV5 346 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 OR10X1Q8NGY0 326 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 C8orf46Q8TAG6 207 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 MBD3L1Q8WWY6 194 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 NEIL1Q96FI4 390 aaPredicted RBP8.51□□□□□ -1.05
VPS25-206ENST00000591584 OR8B2Q96RD0 313 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 HEYLQ9NQ87 328 aaPredicted RBP8.51□□□□□ -1.05
VPS25-206ENST00000591584 TMEM14BQ9NUH8 114 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 CTSZQ9UBR2 303 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 ZFHX4Q86UP3 3567 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 CELSR3Q9NYQ7 3312 aa8.51□□□□□ -1.05
VPS25-206ENST00000591584 A0A1W2PPE3 182 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 INS-IGF2F8WCM5 200 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 MMP23AO75900 390 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 IFNA10P01566 189 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 ARG1P05089 322 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 CCL3L1P16619 93 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 GRNP28799 593 aaKnown RBP8.5□□□□□ -1.05
VPS25-206ENST00000591584 VDAC2P45880 294 aaPredicted RBP8.5□□□□□ -1.05
VPS25-206ENST00000591584 LGALS7P47929 136 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 DLK1P80370 383 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 TMEM41BQ5BJD5 291 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 SP5Q6BEB4 398 aaPredicted RBP8.5□□□□□ -1.05
VPS25-206ENST00000591584 OR4A47Q6IF82 309 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 C11orf71Q6IPW1 123 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 HAPLN4Q86UW8 402 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 ABHD12Q8N2K0 398 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 ZNF709Q8N972 641 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 OR4C13Q8NGP0 309 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 OR5B3Q8NH48 314 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 LEAP2Q969E1 77 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 LHX4Q969G2 390 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 FLYWCH2Q96CP2 140 aaKnown RBP8.5□□□□□ -1.05
VPS25-206ENST00000591584 NKX6-2Q9C056 277 aaPredicted RBP8.5□□□□□ -1.05
VPS25-206ENST00000591584 EIF5A2Q9GZV4 153 aaKnown RBP8.5□□□□□ -1.05
VPS25-206ENST00000591584 TMEM133Q9H2Q1 129 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 KCNIP2Q9NS61 270 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 TCF19Q9Y242 345 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 LOC400499M0QZD8 3231 aa8.5□□□□□ -1.05
VPS25-206ENST00000591584 AKAP13Q12802 2813 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 SPTBN2O15020 2390 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 KBTBD11O94819 623 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 IGHV3-7P01780 117 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 MDKP21741 143 aaPredicted RBP8.49□□□□□ -1.05
VPS25-206ENST00000591584 HOXA1P49639 335 aaPredicted RBP8.49□□□□□ -1.05
VPS25-206ENST00000591584 LINC00205P59089 165 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 KHDC3LQ587J8 217 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 OR8G2PQ6IF36 304 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 ZNF841Q6ZN19 808 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 C1orf229Q6ZS94 237 aaPredicted RBP8.49□□□□□ -1.05
VPS25-206ENST00000591584 SSX9Q7RTT3 188 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 BEND2Q8NDZ0 799 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 RNF5Q99942 180 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 SLC35B3Q9H1N7 401 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 CHODLQ9H9P2 273 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 AMMECR1Q9Y4X0 333 aaPredicted RBP8.49□□□□□ -1.05
VPS25-206ENST00000591584 DSCAMO60469 2012 aa8.49□□□□□ -1.05
VPS25-206ENST00000591584 C15orf62A8K5M9 175 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 H0YJW9 148 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 H7C2Y5 167 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 AGPAT2O15120 278 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 CYB5BO43169 146 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 FCN3O75636 299 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 TSPAN9O75954 239 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 C1QL1O75973 258 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 IFNA1P01562 189 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 SFTA3P0C7M3 94 aa8.48□□□□□ -1.05
VPS25-206ENST00000591584 USF1P22415 310 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms