RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 OR8H3Q8N146 312 aa14.09□□□□□ -0.15
CXXC1-212ENST00000589940 WFDC11Q8NEX6 87 aa14.09□□□□□ -0.15
CXXC1-212ENST00000589940 OR4C13Q8NGP0 309 aa14.09□□□□□ -0.15
CXXC1-212ENST00000589940 GRPEL2Q8TAA5 225 aa14.09□□□□□ -0.15
CXXC1-212ENST00000589940 FLYWCH2Q96CP2 140 aaKnown RBP14.09□□□□□ -0.15
CXXC1-212ENST00000589940 RBMXL1Q96E39 390 aaKnown RBP14.09□□□□□ -0.15
CXXC1-212ENST00000589940 MBD2Q9UBB5 411 aa14.09□□□□□ -0.15
CXXC1-212ENST00000589940 HILPDAQ9Y5L2 63 aa14.09□□□□□ -0.15
CXXC1-212ENST00000589940 ITPR3Q14573 2671 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 CENPVL3A0A0U1RRI6 287 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 FAM90A9PA6NNJ1 464 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 HMSDA8MTL9 139 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 H0YIZ8 118 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 ST8SIA3O43173 380 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 NKX2-1P43699 371 aaPredicted RBP14.08□□□□□ -0.16
CXXC1-212ENST00000589940 MIDNQ504T8 468 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 SSX9Q7RTT3 188 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 FOXRED2Q8IWF2 684 aa14.08□□□□□ -0.16
CXXC1-212ENST00000589940 PRRC2AP48634 2157 aaKnown RBP14.07□□□□□ -0.16
CXXC1-212ENST00000589940 IGHV3-72A0A0B4J1Y9 119 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 OOSP1A8MZH6 123 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 SHOXO15266 292 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 IGHV4-31P0DP07 118 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 ARHGDIBP52566 201 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 CXorf66Q5JRM2 361 aaPredicted RBP14.07□□□□□ -0.16
CXXC1-212ENST00000589940 CCDC144NLQ6NUI1 221 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 PRSS54Q6PEW0 395 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 HARBI1Q96MB7 349 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 AIFM2Q9BRQ8 373 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 RNF126Q9BV68 326 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 TMEM140Q9NV12 185 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 LSM5Q9Y4Y9 91 aaKnown RBP14.07□□□□□ -0.16
CXXC1-212ENST00000589940 POMT1Q9Y6A1 747 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 K7EPK0 472 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 ID3Q02535 119 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 TMEM65Q6PI78 240 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 FAM71E2Q8N5Q1 922 aa14.07□□□□□ -0.16
CXXC1-212ENST00000589940 PAIP2BQ9ULR5 123 aaKnown RBP14.07□□□□□ -0.16
CXXC1-212ENST00000589940 TIMM23O14925 209 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 NPFFO15130 113 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 DEDDO75618 318 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 TGFAP01135 160 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 RLN2P04090 185 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 LYL1P12980 280 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 SAA4P35542 130 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 SSX2Q16385 188 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 OR4A47Q6IF82 309 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 ZNF546Q86UE3 836 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 C9orf62Q8N4C0 152 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.06□□□□□ -0.16
CXXC1-212ENST00000589940 OR5AC2Q9NZP5 309 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 SRRM4A7MD48 611 aaKnown RBP14.06□□□□□ -0.16
CXXC1-212ENST00000589940 ARPC5O15511 151 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 HABP2Q14520 560 aaPredicted RBP14.06□□□□□ -0.16
CXXC1-212ENST00000589940 C17orf50Q8WW18 174 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 MALSU1Q96EH3 234 aa14.06□□□□□ -0.16
CXXC1-212ENST00000589940 MS4A7Q9GZW8 240 aaPredicted RBP14.06□□□□□ -0.16
CXXC1-212ENST00000589940 CR1P17927 2039 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 TRAV40A0A0B4J280 105 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 IGHV1-69DA0A0B4J2H0 117 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 J3QLI3 93 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 IGHV1-69P01742 117 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 OR9G9P0C7N8 305 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 RPS16P62249 146 aaKnown RBP14.05□□□□□ -0.16
CXXC1-212ENST00000589940 LAMTOR1Q6IAA8 161 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 CFHR4Q92496 578 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 DCUN1D4Q92564 292 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 RCL1Q9Y2P8 373 aaKnown RBP14.05□□□□□ -0.16
CXXC1-212ENST00000589940 CELSR1Q9NYQ6 3014 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 FAM90A26D6RGX4 464 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 NXPH3O95157 252 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 POLR2GP62487 172 aaKnown RBP eCLIP14.05□□□□□ -0.16
CXXC1-212ENST00000589940 GPR157Q5UAW9 335 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 DYNAPQ8N1N2 210 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 AJUBAQ96IF1 538 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 TNFSF18Q9UNG2 199 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 HSPB11Q9Y547 144 aa14.05□□□□□ -0.16
CXXC1-212ENST00000589940 RBMXL2O75526 392 aaKnown RBP14.04□□□□□ -0.16
CXXC1-212ENST00000589940 SNAPC5O75971 98 aa14.04□□□□□ -0.16
CXXC1-212ENST00000589940 CD1BP29016 333 aa14.04□□□□□ -0.16
CXXC1-212ENST00000589940 LGALS7P47929 136 aa14.04□□□□□ -0.16
CXXC1-212ENST00000589940 OR4A16Q8NH70 328 aa14.04□□□□□ -0.16
CXXC1-212ENST00000589940 MAGT1Q9H0U3 335 aa14.04□□□□□ -0.16
CXXC1-212ENST00000589940 BET1LQ9NYM9 111 aa14.04□□□□□ -0.16
CXXC1-212ENST00000589940 NSG2Q9Y328 171 aa14.04□□□□□ -0.16
CXXC1-212ENST00000589940 ZNF469Q96JG9 3925 aaPredicted RBP14.04□□□□□ -0.16
CXXC1-212ENST00000589940 VENTXO95231 258 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 IL6RP08887 468 aaPredicted RBP14.03□□□□□ -0.16
CXXC1-212ENST00000589940 SAA1P0DJI8 122 aaPredicted RBP14.03□□□□□ -0.16
CXXC1-212ENST00000589940 PAX6P26367 422 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 RELBQ01201 579 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 LGALSLQ3ZCW2 172 aaPredicted RBP14.03□□□□□ -0.16
CXXC1-212ENST00000589940 AARDQ4LEZ3 155 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 HSPB7Q9UBY9 170 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 TRAV3A0A0B4J244 114 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 E5RGE8 158 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 WRBO00258 174 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 SSSCA1O60232 199 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 IGLV2-23P01705 113 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms