RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 FCN2Q15485 313 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 LRTM2Q8N967 370 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 FAM212BQ9NTI7 297 aaPredicted RBP17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 TCF19Q9Y242 345 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 RBFOX2O43251 390 aaKnown RBP eCLIP17.04■□□□□ 0.322e-7■■■■□ 24.7
R3HDM4-204ENST00000589428 TMEM268Q5VZI3 342 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 LGI3Q8N145 548 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 PIFOQ8TCI5 191 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 RAB18Q9NP72 206 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 FBN1P35555 2871 aaKnown RBP17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 SULT1A3P0DMM9 295 aa17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 SULT1A4P0DMN0 295 aa17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 KIR2DS2P43631 304 aa17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 LPAR6P43657 344 aa17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 DHRS7BQ6IAN0 325 aaPredicted RBP17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 SELENOHQ8IZQ5 122 aaKnown RBP17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 SLC35G3Q8N808 338 aa17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 OR11H7Q8NGC8 314 aa17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 CD300LFQ8TDQ1 290 aa17.03■□□□□ 0.32
R3HDM4-204ENST00000589428 TIMM23O14925 209 aa17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 ADAP1O75689 374 aa17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 S1PR2O95136 353 aa17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 IGKV1-16P04430 117 aa17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 CXCL3P19876 107 aa17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 OR4S2Q8NH73 311 aa17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 RBPMSQ93062 196 aaKnown RBP17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 SLC35D1Q9NTN3 355 aa17.02■□□□□ 0.32
R3HDM4-204ENST00000589428 IGHV3-72A0A0B4J1Y9 119 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 APOA2P02652 100 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 RTL8BQ17RB0 113 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 LYZL2Q7Z4W2 148 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 MOB3BQ86TA1 216 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 ZNF695Q8IW36 515 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 IL22RA2Q969J5 263 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 MGAT4CQ9UBM8 478 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 HMX3A6NHT5 357 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 CCSO14618 274 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 GOSR2O14653 212 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 CRYZL1O95825 349 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 RPA2P15927 270 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 CHAC2Q8WUX2 184 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 CFHR4Q92496 578 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 MDFIQ99750 246 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 WASHC3Q9Y3C0 194 aa17.01■□□□□ 0.31
R3HDM4-204ENST00000589428 A6NDX4 124 aa17■□□□□ 0.31
R3HDM4-204ENST00000589428 H7C2Y5 167 aa17■□□□□ 0.31
R3HDM4-204ENST00000589428 HOXB5P09067 269 aa17■□□□□ 0.31
R3HDM4-204ENST00000589428 CD24P25063 80 aa17■□□□□ 0.31
R3HDM4-204ENST00000589428 TAGLNQ01995 201 aaKnown RBP17■□□□□ 0.31
R3HDM4-204ENST00000589428 HABP2Q14520 560 aaPredicted RBP17■□□□□ 0.31
R3HDM4-204ENST00000589428 TMEM219Q86XT9 240 aa17■□□□□ 0.31
R3HDM4-204ENST00000589428 PLEKHA2Q9HB19 425 aa17■□□□□ 0.31
R3HDM4-204ENST00000589428 HPRT1P00492 218 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 FAM106CPP0CH98 169 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 TRAPPC2P0DI81 140 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 TRAPPC2BP0DI82 140 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 HKR1P10072 659 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 PDPNQ86YL7 162 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 OR5M8Q8NGP6 311 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 COL6A5A8TX70 2615 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 MPTX1A8MV57 137 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 SIX6O95475 246 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 IGKV1-5P01602 117 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 RRASP10301 218 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 HLA-GP17693 338 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 MC5RP33032 325 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 H2BFSP57053 126 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 HES1Q14469 280 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 SEC22AQ96IW7 307 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 COMMD9Q9P000 198 aa16.99■□□□□ 0.31
R3HDM4-204ENST00000589428 DUXBA0A1W2PPF3 345 aa16.98■□□□□ 0.31
R3HDM4-204ENST00000589428 CHST1O43916 411 aa16.98■□□□□ 0.31
R3HDM4-204ENST00000589428 SNRNP70P08621 437 aaKnown RBP16.98■□□□□ 0.31
R3HDM4-204ENST00000589428 NMSQ5H8A3 153 aa16.98■□□□□ 0.31
R3HDM4-204ENST00000589428 GGNBP1Q5YKI7 109 aa16.98■□□□□ 0.31
R3HDM4-204ENST00000589428 THNSL2Q86YJ6 484 aa16.98■□□□□ 0.31
R3HDM4-204ENST00000589428 C1RLQ9NZP8 487 aa16.98■□□□□ 0.31
R3HDM4-204ENST00000589428 A0A0G2JRQ6 117 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 MARCH11A6NNE9 402 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 KRASP01116 189 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 VDAC1P21796 283 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 G6PCP35575 357 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 AKR1C2P52895 323 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 TMEM177Q53S58 311 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 R3HDM4Q96D70 268 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 TMED3Q9Y3Q3 217 aa16.97■□□□□ 0.31
R3HDM4-204ENST00000589428 TMEM89A2RUT3 159 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 FAM90A9PA6NNJ1 464 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 IGKV1D-33P01593 117 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 IGKV1-33P01594 117 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 C16orf82Q7Z2V1 217 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 VKORC1L1Q8N0U8 176 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 OR4C13Q8NGP0 309 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 FLYWCH2Q96CP2 140 aaKnown RBP16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 SLC25A33Q9BSK2 321 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 NPFFR1Q9GZQ6 430 aa16.96■□□□□ 0.31
R3HDM4-204ENST00000589428 PIGBOS1A0A0B4J2F0 54 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 FAM25EA8MYX2 175 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 NDUFA7O95182 113 aa16.96■□□□□ 0.3
R3HDM4-204ENST00000589428 P0C879 139 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms