RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 DHRS2Q13268 280 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 RAB2BQ8WUD1 216 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 SFRP2Q96HF1 295 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 PHB2Q99623 299 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 ZNF2Q9BSG1 426 aaPredicted RBP4.41□□□□□ -1.7
VMP1-208ENST00000588617 ULBP3Q9BZM4 244 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 CMTM6Q9NX76 183 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 DOK5Q9P104 306 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 ARL5AQ9Y689 179 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 CCDC141Q6ZP82 1450 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 MBD5Q9P267 1494 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 WDR7Q9Y4E6 1490 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 ATAD5Q96QE3 1844 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 MAPKBP1O60336 1514 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 PREX2Q70Z35 1606 aa4.4□□□□□ -1.7
VMP1-208ENST00000588617 IGSF23A1L1A6 192 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 FGF6P10767 208 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 ESDP10768 282 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 MAGEA12P43365 314 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 CDK10Q15131 360 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 SCXQ7RTU7 201 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 PXT1Q8NFP0 134 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 SIGMAR1Q99720 223 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 NKX6-2Q9C056 277 aaPredicted RBP4.4□□□□□ -1.71
VMP1-208ENST00000588617 SNX12Q9UMY4 172 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 GCC2Q8IWJ2 1684 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.4□□□□□ -1.71
VMP1-208ENST00000588617 MAST1Q9Y2H9 1570 aa4.4□□□□□ -1.71
VMP1-208ENST00000588617 NOS1APO75052 506 aaPredicted RBP4.39□□□□□ -1.71
VMP1-208ENST00000588617 FOXA1P55317 472 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 KRTAP10-3P60369 221 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 LIN52Q52LA3 116 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 OR10X1Q8NGY0 326 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 BTF3L4Q96K17 158 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 DUSP21Q9H596 190 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 GPR84Q9NQS5 396 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 CHD5Q8TDI0 1954 aa4.39□□□□□ -1.71
VMP1-208ENST00000588617 ZCCHC11Q5TAX3 1644 aaKnown RBP4.39□□□□□ -1.71
VMP1-208ENST00000588617 RTEL1-TNFRSF6BF6WH68 1400 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 KDM5DQ9BY66 1539 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 E5RI56 91 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 C15orf65H3BRN8 121 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 INAFM2P0DMQ5 153 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 G0S2P27469 103 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 TSPEAR-AS2P59090 65 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 RPS11P62280 158 aaKnown RBP eCLIP4.38□□□□□ -1.71
VMP1-208ENST00000588617 AMTNQ6UX39 209 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 H1FOOQ8IZA3 346 aaPredicted RBP4.38□□□□□ -1.71
VMP1-208ENST00000588617 EIF4E3Q8N5X7 224 aaKnown RBP4.38□□□□□ -1.71
VMP1-208ENST00000588617 AP3S1Q92572 193 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 CNBD2Q96M20 576 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 CMSS1Q9BQ75 279 aaKnown RBP4.38□□□□□ -1.71
VMP1-208ENST00000588617 ANGPT4Q9Y264 503 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 ABCA9Q8IUA7 1624 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 CROCC2H7BZ55 1655 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 CDC42BPAQ5VT25 1732 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 DCCP43146 1447 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 ANKRD50Q9ULJ7 1429 aa4.38□□□□□ -1.71
VMP1-208ENST00000588617 ARHGAP5Q13017 1502 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 PLXNC1O60486 1568 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 TTC37Q6PGP7 1564 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 SAMD9LQ8IVG5 1584 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 GGTLC3B5MD39 225 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 UBE2L6O14933 153 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 CST2P09228 141 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 HIST1H1TP22492 207 aaPredicted RBP4.37□□□□□ -1.71
VMP1-208ENST00000588617 NPPCP23582 126 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 GNG10P50151 68 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 TNFAIP6P98066 277 aaPredicted RBP4.37□□□□□ -1.71
VMP1-208ENST00000588617 PSG4Q00888 419 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 LPCAT3Q6P1A2 487 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 RASL11AQ6T310 242 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 C20orf196Q8IYI0 205 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 SLC22A24Q8N4F4 322 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 DAND5Q8N907 189 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 OR10A6Q8NH74 314 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 KLK6Q92876 244 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 MGLLQ99685 303 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 SELENOSQ9BQE4 189 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 ATPIF1Q9UII2 106 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 ADGBQ8N7X0 1667 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 ERBINQ96RT1 1412 aa4.37□□□□□ -1.71
VMP1-208ENST00000588617 ABCC1P33527 1531 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 DSCAML1Q8TD84 2053 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 ZNF189O75820 626 aaPredicted RBP4.36□□□□□ -1.71
VMP1-208ENST00000588617 TTRP02766 147 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 SLC25A16P16260 332 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 CRYBB3P26998 211 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 HIST1H3AP68431 136 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 H3F3AP84243 136 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 CAV1Q03135 178 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 SLC35F6Q8N357 371 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 PACRGLQ8N7B6 248 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 OR11H1Q8NG94 326 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 BORCS7Q96B45 105 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 UPK3BQ9BT76 320 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 KIFC1Q9BW19 673 aa4.36□□□□□ -1.71
VMP1-208ENST00000588617 RSPO3Q9BXY4 272 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms