RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.03■□□□□ 0.961e-7■■■□□ 15.9
SCAMP4-210ENST00000588555 ZANQ9Y493 2812 aa21.03■□□□□ 0.96
SCAMP4-210ENST00000588555 A0A1W2PPI3 338 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 FAM90A9PA6NNJ1 464 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 H7C2Y5 167 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 KCNAB3O43448 404 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 ERVK-16P61578 105 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 POLR2GP62487 172 aaKnown RBP eCLIP21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 LHX4Q969G2 390 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 MFFQ9GZY8 342 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 WASHC3Q9Y3C0 194 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 A0A1W2PRD5 423 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 A0A1W2PRF3 423 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 A0A1W2PRM7 423 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 SRRM4A7MD48 611 aaKnown RBP21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 NXPH3O95157 252 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 RLN2P04090 185 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 OR9G9P0C7N8 305 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 MC5RP33032 325 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 OSR1Q8TAX0 266 aaPredicted RBP21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 TMEM140Q9NV12 185 aa21.02■□□□□ 0.96
SCAMP4-210ENST00000588555 RNF223E7ERA6 249 aa21.01■□□□□ 0.95
SCAMP4-210ENST00000588555 SNAPC5O75971 98 aa21.01■□□□□ 0.95
SCAMP4-210ENST00000588555 HRASP01112 189 aa21.01■□□□□ 0.95
SCAMP4-210ENST00000588555 CEACAM3P40198 252 aa21.01■□□□□ 0.95
SCAMP4-210ENST00000588555 RAB13P51153 203 aa21.01■□□□□ 0.95
SCAMP4-210ENST00000588555 REG4Q9BYZ8 158 aa21.01■□□□□ 0.95
SCAMP4-210ENST00000588555 MAGT1Q9H0U3 335 aa21.01■□□□□ 0.95
SCAMP4-210ENST00000588555 L7N2F9 121 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 ARHGDIBP52566 201 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 MINOS1Q5TGZ0 78 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 OR4C13Q8NGP0 309 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 FLYWCH2Q96CP2 140 aaKnown RBP21■□□□□ 0.95
SCAMP4-210ENST00000588555 CTNNBIP1Q9NSA3 81 aaPredicted RBP21■□□□□ 0.95
SCAMP4-210ENST00000588555 MINOS1-NBL1R4GNA1 71 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 IGHV3-72A0A0B4J1Y9 119 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 IL6RP08887 468 aaPredicted RBP21■□□□□ 0.95
SCAMP4-210ENST00000588555 ZNF345Q14585 488 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 AARDQ4LEZ3 155 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 OR4A47Q6IF82 309 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 ACOT7LQ6ZUV0 252 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 Q96MF0 132 aa21■□□□□ 0.95
SCAMP4-210ENST00000588555 CREBBPQ92793 2442 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 CELSR1Q9NYQ6 3014 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 MSGN1A6NI15 193 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 FAM90A26D6RGX4 464 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 E5RGE8 158 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 MOB3BQ86TA1 216 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 HARBI1Q96MB7 349 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 HSPB7Q9UBY9 170 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 NSG2Q9Y328 171 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 HILPDAQ9Y5L2 63 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 CR1P17927 2039 aa20.99■□□□□ 0.95
SCAMP4-210ENST00000588555 TRAV3A0A0B4J244 114 aa20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 SHOXO15266 292 aa20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 RELBQ01201 579 aa20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 LINC01356Q8N9X3 169 aa20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 MAPK1IP1LQ8NDC0 245 aa20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 HIF1ANQ9NWT6 349 aa20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 TBL2Q9Y4P3 447 aaKnown RBP20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 CCDC168Q8NDH2 2452 aa20.98■□□□□ 0.95
SCAMP4-210ENST00000588555 TRAV20A0A0B4J274 112 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 CENPVL3A0A0U1RRI6 287 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 SSSCA1O60232 199 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 OR2F2O95006 317 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 OR2F1Q13607 317 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 HABP2Q14520 560 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 TMUB2Q71RG4 321 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 OR8H3Q8N146 312 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 KCNRGQ8N5I3 272 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 INO80EQ8NBZ0 244 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 C17orf50Q8WW18 174 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 CFHR4Q92496 578 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 AJUBAQ96IF1 538 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 AQP10Q96PS8 301 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 ITPR3Q14573 2671 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 CHST1O43916 411 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 TMEM50AO95807 157 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 AP2S1P53680 142 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 TNFRSF9Q07011 255 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 DYNAPQ8N1N2 210 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 AIFM2Q9BRQ8 373 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 MS4A7Q9GZW8 240 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 AUP1Q9Y679 476 aa20.97■□□□□ 0.95
SCAMP4-210ENST00000588555 PRRC2AP48634 2157 aaKnown RBP20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 TIMM23O14925 209 aa20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 IGLV2-23P01705 113 aa20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 SAA1P0DJI8 122 aaPredicted RBP20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 S100A11P31949 105 aa20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 LGALS4P56470 323 aa20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 PUSL1Q8N0Z8 303 aaKnown RBP20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 RITA1Q96K30 269 aa20.96■□□□□ 0.95
SCAMP4-210ENST00000588555 OOSP1A8MZH6 123 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 SYNGR2O43760 224 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 HKR1P10072 659 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 GATA3P23771 443 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 PAX6P26367 422 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 PAX9P55771 341 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 OR2B8PP59922 312 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 QTRT1Q9BXR0 403 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms