RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
PRKCSH-204ENST00000587290 TMEM68Q96MH6 324 aa11.51□□□□□ -0.57
PRKCSH-204ENST00000587290 GPHA2Q96T91 129 aa11.51□□□□□ -0.57
PRKCSH-204ENST00000587290 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
PRKCSH-204ENST00000587290 ATG5Q9H1Y0 275 aa11.51□□□□□ -0.57
PRKCSH-204ENST00000587290 TRAV1-2A0A0B4J238 106 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 IGKV1D-13A0A0B4J2D9 117 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 PDCD5O14737 125 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 OR2J3O76001 311 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 OR2A4O95047 310 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 BRI3O95415 125 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 IGKV1-13P0DP09 117 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 RRASP10301 218 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 RAB3BP20337 219 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 RAB6AP20340 208 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 MYL9P24844 172 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 PSMD7P51665 324 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 CD81P60033 236 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 CD300EQ496F6 205 aaPredicted RBP11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 KCTD9Q7L273 389 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 ZNF367Q7RTV3 350 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 Q8N402 240 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 SNAPC3Q92966 411 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 NDUFB11Q9NX14 153 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 S4R3C0 116 aa11.5□□□□□ -0.57
PRKCSH-204ENST00000587290 TUSC2O75896 110 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 DIRAS3O95661 229 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 IGLV2-14P01704 120 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 IGHV3-23P01764 117 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 CD7P09564 240 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 MECP2P51608 486 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 CDK10Q15131 360 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 TATDN3Q17R31 274 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 IZUMO2Q6UXV1 221 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 ADTRPQ96IZ2 230 aa11.49□□□□□ -0.57
PRKCSH-204ENST00000587290 TRBV9A0A0B4J1U6 114 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 TMEM235A6NFC5 223 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 E7EUB6 86 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 MYOD1P15172 320 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 CDNFQ49AH0 187 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 Q6ZS49 121 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 DEFB125Q8N687 156 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 OSR1Q8TAX0 266 aaPredicted RBP11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 CACNG8Q8WXS5 425 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 SIGLEC8Q9NYZ4 499 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 SPATA2Q9UM82 520 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 CEPT1Q9Y6K0 416 aa11.48□□□□□ -0.57
PRKCSH-204ENST00000587290 A0A1B0GW64 132 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 TRDV1A0A1B0GX56 115 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 METTL21EPA6NDL7 271 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 TEX22C9J3V5 150 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 ACTL6BO94805 426 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 DTYMKP23919 212 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 DYNLRB2Q8TF09 96 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 FYTTD1Q96QD9 318 aaKnown RBP11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 NEURL2Q9BR09 285 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 RBMX2Q9Y388 322 aaKnown RBP11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 OR2W1Q9Y3N9 320 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 DMRT1Q9Y5R6 373 aa11.47□□□□□ -0.57
PRKCSH-204ENST00000587290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 RBMY1BA6NDE4 496 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 RBMY1EA6NEQ0 496 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 ZNF785A8K8V0 405 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 SSX5O60225 188 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 OR2C1O95371 312 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 IL6RP08887 468 aaPredicted RBP11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 RBMY1DP0C7P1 496 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 PTHLHP12272 177 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 BRWD1-AS2P59051 145 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 GUCA2BQ16661 112 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 HACD4Q5VWC8 232 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 SSX9Q7RTT3 188 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 MMD2Q8IY49 270 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 TTC9CQ8N5M4 171 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 TCTEX1D2Q8WW35 142 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 WDR89Q96FK6 387 aaPredicted RBP11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 SPIN2AQ99865 258 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 TAS2R8Q9NYW2 309 aa11.46□□□□□ -0.57
PRKCSH-204ENST00000587290 ALMS1Q8TCU4 4167 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 C2orf70A6NJV1 201 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 TPPPO94811 219 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 NDUFB8O95169 186 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 HLA-DQB1P01920 261 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 IFNA6P05013 189 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 REG1AP05451 166 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 FCER2P06734 321 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 AREGP15514 252 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 DEFB114Q30KQ6 69 aa11.45□□□□□ -0.58
PRKCSH-204ENST00000587290 LINC00322Q6ZN03 302 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms