RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PSMD7P51665 324 aa10.87□□□□□ -0.67
SDF2-202ENST00000585428 RPS25P62851 125 aaKnown RBP10.87□□□□□ -0.67
SDF2-202ENST00000585428 TRAM1Q15629 374 aa10.87□□□□□ -0.67
SDF2-202ENST00000585428 FAM209BQ5JX69 171 aa10.87□□□□□ -0.67
SDF2-202ENST00000585428 Q6ZS49 121 aa10.87□□□□□ -0.67
SDF2-202ENST00000585428 GPHB5Q86YW7 130 aa10.87□□□□□ -0.67
SDF2-202ENST00000585428 H1FOOQ8IZA3 346 aaPredicted RBP10.87□□□□□ -0.67
SDF2-202ENST00000585428 WFDC10AQ9H1F0 79 aa10.87□□□□□ -0.67
SDF2-202ENST00000585428 RAB27BO00194 218 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 EBAG9O00559 213 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 MPPED1O15442 326 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 TUSC2O75896 110 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 OR2C1O95371 312 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 GNB3P16520 340 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 CBLN1P23435 193 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 MRPS15P82914 257 aaKnown RBP10.86□□□□□ -0.67
SDF2-202ENST00000585428 FABP5Q01469 135 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 CDK10Q15131 360 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 RCN1Q15293 331 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 KLK9Q2XQG4 91 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 OR10R2Q8NGX6 335 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 ACOT12Q8WYK0 555 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 MAFIPQ8WZ33 124 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 WDR89Q96FK6 387 aaPredicted RBP10.86□□□□□ -0.67
SDF2-202ENST00000585428 CENPOQ9BU64 300 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 DUSP21Q9H596 190 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 SCN3BQ9NY72 215 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 KLK9Q9UKQ9 250 aa10.86□□□□□ -0.67
SDF2-202ENST00000585428 RBM7Q9Y580 266 aaKnown RBP10.86□□□□□ -0.67
SDF2-202ENST00000585428 IGKV1D-8A0A087WSZ0 117 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 PPP5D1E7EU14 171 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 MFNGO00587 321 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 GGCTO75223 188 aaKnown RBP10.85□□□□□ -0.67
SDF2-202ENST00000585428 OR2J3O76001 311 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 HLA-AP01891 365 aaKnown RBP10.85□□□□□ -0.67
SDF2-202ENST00000585428 SAA1P0DJI8 122 aaPredicted RBP10.85□□□□□ -0.67
SDF2-202ENST00000585428 PSMA1P25786 263 aaKnown RBP10.85□□□□□ -0.67
SDF2-202ENST00000585428 CALRP27797 417 aaKnown RBP10.85□□□□□ -0.67
SDF2-202ENST00000585428 GUCA2BQ16661 112 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 SLC25A42Q86VD7 318 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 MMD2Q8IY49 270 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 DYNLRB2Q8TF09 96 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 OVOL2Q9BRP0 275 aa10.85□□□□□ -0.67
SDF2-202ENST00000585428 PLECQ15149 4684 aaKnown RBP10.85□□□□□ -0.67
SDF2-202ENST00000585428 HMX3A6NHT5 357 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 TEX22C9J3V5 150 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 E7EUB6 86 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 ACTL6BO94805 426 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 IGLV2-14P01704 120 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 IL6RP08887 468 aaPredicted RBP10.84□□□□□ -0.67
SDF2-202ENST00000585428 HSMCR30P0CW71 290 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 HIST1H1DP16402 221 aaKnown RBP10.84□□□□□ -0.67
SDF2-202ENST00000585428 C10orf55Q5SWW7 151 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 HES5Q5TA89 166 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 GINS4Q9BRT9 223 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 OR51E2Q9H255 320 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 ACOT13Q9NPJ3 140 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 ZNF257Q9Y2Q1 563 aa10.84□□□□□ -0.67
SDF2-202ENST00000585428 A0A1B0GW64 132 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 NPIPB5A8MRT5 1133 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 CREBL2O60519 120 aaPredicted RBP10.83□□□□□ -0.68
SDF2-202ENST00000585428 FCGR3BO75015 233 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 HLA-DQB1P01920 261 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 CRYGCP07315 174 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 RAB6AP20340 208 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 BRWD1-AS2P59051 145 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 RPL30P62888 115 aaKnown RBP10.83□□□□□ -0.68
SDF2-202ENST00000585428 MLLT11Q13015 90 aaPredicted RBP10.83□□□□□ -0.68
SDF2-202ENST00000585428 SLC2A9Q9NRM0 540 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 FBXL7Q9UJT9 491 aa10.83□□□□□ -0.68
SDF2-202ENST00000585428 ELF5Q9UKW6 265 aaPredicted RBP10.83□□□□□ -0.68
SDF2-202ENST00000585428 TRAV1-2A0A0B4J238 106 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 IFITM5A6NNB3 132 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 NDUFB8O95169 186 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 ZNF735P0CB33 412 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 GADD45AP24522 165 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PRR20EP86478 221 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PRR20CP86479 221 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PRR20DP86480 221 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PRR20BP86481 221 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PRR20AP86496 221 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 EIF4EBP1Q13541 118 aaPredicted RBP10.82□□□□□ -0.68
SDF2-202ENST00000585428 C19orf35Q6ZS72 473 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 SLC16A13Q7RTY0 426 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 TMEM61Q8N0U2 210 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 VKORC1L1Q8N0U8 176 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PUSL1Q8N0Z8 303 aaKnown RBP10.82□□□□□ -0.68
SDF2-202ENST00000585428 ZNF645Q8N7E2 425 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 LINC00476Q8WZB0 136 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 MGLLQ99685 303 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 DCUN1D5Q9BTE7 237 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 KRTAP17-1Q9BYP8 105 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 MLXQ9UH92 298 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 PRELID3BQ9Y3B1 194 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 TPRKBQ9Y3C4 175 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms