RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SRRM4A7MD48 611 aaKnown RBP12.94□□□□□ -0.34
SS18-226ENST00000585241 GOSR2O14653 212 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 SPDEFO95238 335 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 MOSP00540 346 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 IFNA21P01568 189 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 SNRNP70P08621 437 aaKnown RBP12.94□□□□□ -0.34
SS18-226ENST00000585241 HOXB5P09067 269 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 SLC25A6P12236 298 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 CXCL3P19876 107 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 PUSL1Q8N0Z8 303 aaKnown RBP12.94□□□□□ -0.34
SS18-226ENST00000585241 OR2T10Q8NGZ9 312 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 PIFOQ8TCI5 191 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 RHOVQ96L33 236 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 SMR3AQ99954 134 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 FAM96BQ9Y3D0 163 aa12.94□□□□□ -0.34
SS18-226ENST00000585241 SONP18583 2426 aaKnown RBP12.93□□□□□ -0.34
SS18-226ENST00000585241 CCSO14618 274 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 SHOXO15266 292 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 OR2A4O95047 310 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 KRASP01116 189 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 IGKV1D-33P01593 117 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 IGKV1-33P01594 117 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 G6PCP35575 357 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 AKR1C2P52895 323 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 H2BFSP57053 126 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 ERVK-16P61578 105 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 LRRC75BQ2VPJ9 315 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 DEFB112Q30KQ8 113 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 BCL6BQ8N143 479 aaPredicted RBP12.93□□□□□ -0.34
SS18-226ENST00000585241 ASB13Q8WXK3 278 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 GPR146Q96CH1 333 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 RBMXL1Q96E39 390 aaKnown RBP12.93□□□□□ -0.34
SS18-226ENST00000585241 RRNAD1Q96FB5 475 aaKnown RBP12.93□□□□□ -0.34
SS18-226ENST00000585241 EAF1Q96JC9 268 aaPredicted RBP12.93□□□□□ -0.34
SS18-226ENST00000585241 OR2A7Q96R45 310 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 BET1LQ9NYM9 111 aa12.93□□□□□ -0.34
SS18-226ENST00000585241 ANK3Q12955 4377 aaKnown RBP12.92□□□□□ -0.34
SS18-226ENST00000585241 HIVEP1P15822 2718 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 CELSR1Q9NYQ6 3014 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 MPTX1A8MV57 137 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 NDUFA3O95167 84 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 CRYGBP07316 175 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 FGF2P09038 288 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 SAA1P0DJI8 122 aaPredicted RBP12.92□□□□□ -0.34
SS18-226ENST00000585241 HNF1AP20823 631 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 UBE2KP61086 200 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 RPS16P62249 146 aaKnown RBP12.92□□□□□ -0.34
SS18-226ENST00000585241 AARDQ4LEZ3 155 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 FBLN7Q53RD9 439 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 GSG1LQ6UXU4 331 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 NPBQ8NG41 125 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 RITA1Q96K30 269 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
SS18-226ENST00000585241 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 TMEM140Q9NV12 185 aa12.92□□□□□ -0.34
SS18-226ENST00000585241 SVEP1Q4LDE5 3571 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 A0A1B0GU03 582 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 PITX3O75364 302 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 GIPP09681 153 aaPredicted RBP12.91□□□□□ -0.34
SS18-226ENST00000585241 IL15RAQ13261 267 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 VMA21Q3ZAQ7 101 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 OR4A47Q6IF82 309 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 H2BFWTQ7Z2G1 175 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 TEX45Q8NA69 505 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 DMBX1Q8NFW5 382 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 OR8H1Q8NGG4 311 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 OR4A5Q8NH83 315 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 VSTM2AQ8TAG5 236 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 C2orf50Q96LR7 162 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 SSX3Q99909 188 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 ZNF436Q9C0F3 470 aaPredicted RBP12.91□□□□□ -0.34
SS18-226ENST00000585241 HIVEP2P31629 2446 aa12.91□□□□□ -0.34
SS18-226ENST00000585241 MDFIC2A0A1B0GVS7 189 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 SIX6O95475 246 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 CD24P25063 80 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 SMCO1Q147U7 214 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 PSG5Q15238 335 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
SS18-226ENST00000585241 CLEC9AQ6UXN8 241 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 Q6ZRM9 215 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 IL17RELQ6ZVW7 336 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 SSX9Q7RTT3 188 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 FOXRED2Q8IWF2 684 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 VKORC1L1Q8N0U8 176 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 ZBTB8BQ8NAP8 495 aaPredicted RBP12.9□□□□□ -0.34
SS18-226ENST00000585241 RNASE11Q8TAA1 199 aaKnown RBP12.9□□□□□ -0.34
SS18-226ENST00000585241 TMEM167AQ8TBQ9 72 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 ZNF48Q96MX3 618 aaPredicted RBP12.9□□□□□ -0.34
SS18-226ENST00000585241 NMES1Q9C002 83 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 PLSCR3Q9NRY6 295 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 TCF19Q9Y242 345 aa12.9□□□□□ -0.34
SS18-226ENST00000585241 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
SS18-226ENST00000585241 A6NDX4 124 aa12.89□□□□□ -0.35
SS18-226ENST00000585241 UPK2O00526 184 aa12.89□□□□□ -0.35
SS18-226ENST00000585241 RRHO14718 337 aa12.89□□□□□ -0.35
SS18-226ENST00000585241 NBR2O15453 112 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms