RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 TUBG2Q9NRH3 451 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 OR6C3Q9NZP0 311 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 URB1O60287 2271 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 XKRY2A2RUG3 117 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PROP1O75360 226 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 LY86O95711 162 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 IGHG3P01860 377 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TYMSP04818 313 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 OR9G9P0C7N8 305 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PDLIM4P50479 330 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 HES3Q5TGS1 186 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TRAT1Q6PIZ9 186 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 OR2T10Q8NGZ9 312 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 ACY3Q96HD9 319 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 DCTN5Q9BTE1 182 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TSTD3H0UI37 97 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PDE6DO43924 150 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SOX15O60248 233 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 DUTP33316 252 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FABP6P51161 128 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SOX8P57073 446 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 P2RY6Q15077 328 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 ACTL10Q5JWF8 245 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CYB5R2Q6BCY4 276 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CD177Q8N6Q3 437 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CNEP1R1Q8N9A8 125 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 C1orf162Q8NEQ5 155 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 RHOVQ96L33 236 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FZR1Q9UM11 496 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FAM90A9PA6NNJ1 464 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 KIR2DL2P43627 348 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GCSAMLQ5JQS6 135 aa11.8□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TRAV38-1A0A0B4J264 116 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TMPRSS2O15393 492 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 HPRT1P00492 218 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CECR9P0C854 216 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GZMBP10144 247 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 RAB4AP20338 218 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 DDTP30046 118 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GPR12P47775 334 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 LINC01551Q86U37 167 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CISD2Q8N5K1 135 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FCGR3BO75015 233 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 MPDU1O75352 247 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SP9P0CG40 484 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CD99P14209 185 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PRDX2P32119 198 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GNB1P62873 340 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 LCN2P80188 198 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 ZNF718Q3SXZ3 478 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 VWA1Q6PCB0 445 aa11.79□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PRRC2CQ9Y520 2896 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 IFNA10P01566 189 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PAX1P15863 534 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CD82P27701 267 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GNG10P50151 68 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 EDDM3AQ14507 147 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 MBNL2Q5VZF2 373 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 KCNIP4Q6PIL6 250 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 LRRC29Q8WV35 223 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 KCNIP2Q9NS61 270 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FUT9Q9Y231 359 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CRYAAP02489 173 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GCH1P30793 250 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 ATP5G3P48201 142 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 EDDM3BP56851 147 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 LTC4SQ16873 150 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 MORN2Q502X0 79 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PDLIM3Q53GG5 364 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TREML4Q6UXN2 200 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FAM90A1Q86YD7 464 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 OR52E5Q8NH55 327 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FAM216AQ8WUB2 273 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TMEM37Q8WXS4 190 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PRO1933Q9H354 126 aa11.78□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.52
CDK5RAP3-237ENST00000585163 NCOR1O75376 2440 aa11.77□□□□□ -0.52
CDK5RAP3-237ENST00000585163 A0A1W2PPV4 95 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IGLV1-44P01699 117 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CHRNA7P36544 502 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 OPRK1P41145 380 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TMPRSS3P57727 454 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 UBE2G2P60604 165 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PRAMEF5Q5TYX0 476 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CST9LP1Q5W188 147 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 REC114Q7Z4M0 266 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 OR4A16Q8NH70 328 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 Q8TCH9 128 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 LOXL4Q96JB6 756 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 GNG12Q9UBI6 72 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 JPT1Q9UK76 154 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 HCFC1P51610 2035 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 A0A087X0M5 115 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 A0A1B0GX30 115 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PRSS46E5RG02 174 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 RBFOX2O43251 390 aaKnown RBP eCLIP11.77□□□□□ -0.532e-11■□□□□ 9.3
CDK5RAP3-237ENST00000585163 NDUFB4O95168 129 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 NDUFB7P17568 137 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms