RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 C13orf42A0A1B0GVH6 325 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 LINC00473A8K010 186 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 OVOL1O14753 267 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 SSX5O60225 188 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 FCGR3BO75015 233 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 ACTL6BO94805 426 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 TRGV3P03979 118 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 CRYGBP07316 175 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 UBE2KP61086 200 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 PJVKQ0ZLH3 352 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 MZT2AQ6P582 158 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 KCTD9Q7L273 389 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 POC5Q8NA72 575 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 OR5T1Q8NG75 326 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 DDB2Q92466 427 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 SLC25A38Q96DW6 304 aa9.6□□□□□ -0.87
SS18-225ENST00000585121 C6orf62Q9GZU0 229 aaPredicted RBP9.6□□□□□ -0.87
SS18-225ENST00000585121 RBMX2Q9Y388 322 aaKnown RBP9.6□□□□□ -0.87
SS18-225ENST00000585121 SRRM4A7MD48 611 aaKnown RBP9.59□□□□□ -0.87
SS18-225ENST00000585121 MPPED1O15442 326 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 HSPB1P04792 205 aaKnown RBP9.59□□□□□ -0.87
SS18-225ENST00000585121 ECI1P42126 302 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 ZNF846Q147U1 533 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 TNXAQ16473 311 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 HOGA1Q86XE5 327 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 DCUN1D4Q92564 292 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 RHOVQ96L33 236 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 HSD17B10Q99714 261 aaKnown RBP9.59□□□□□ -0.87
SS18-225ENST00000585121 WDR12Q9GZL7 423 aaKnown RBP9.59□□□□□ -0.87
SS18-225ENST00000585121 ALX4Q9H161 411 aaPredicted RBP9.59□□□□□ -0.87
SS18-225ENST00000585121 AUNIPQ9H7T9 357 aa9.59□□□□□ -0.87
SS18-225ENST00000585121 CTDSP2O14595 271 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 XRCC3O43542 346 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 ETV6P41212 452 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 ZNF45Q02386 682 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 CD69Q07108 199 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 PRSS8Q16651 343 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 UBE2NLQ5JXB2 153 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 ZNF429Q86V71 674 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 GVQW1Q8N7I0 195 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 OR4S2Q8NH73 311 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 TCTEX1D2Q8WW35 142 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 AKIP1Q9NQ31 210 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 IFT46Q9NQC8 304 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 COA4Q9NYJ1 87 aa9.58□□□□□ -0.88
SS18-225ENST00000585121 IGKV1D-13A0A0B4J2D9 117 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 MSGN1A6NI15 193 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 SAP30O75446 220 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 LY86O95711 162 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 IGKV1-13P0DP09 117 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 AADACP22760 399 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 FCGR2CP31995 323 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 KIR2DS2P43631 304 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 SLURP1P55000 103 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 MSMO1Q15800 293 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 OR2B11Q5JQS5 317 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 ASPHD1Q5U4P2 390 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 ZNF66Q6ZN08 573 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 IDO2Q6ZQW0 420 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 MMD2Q8IY49 270 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 VSTM2AQ8TAG5 236 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 SECTM1Q8WVN6 248 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
SS18-225ENST00000585121 CMTM3Q96MX0 182 aa9.57□□□□□ -0.88
SS18-225ENST00000585121 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 A0A087WW49 117 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 RGS5O15539 181 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SAA1P0DJI8 122 aaPredicted RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 TNFSF8P32971 234 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 RPL30P62888 115 aaKnown RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 CDK10Q15131 360 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 TMEM69Q5SWH9 247 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 OVCH2Q7RTZ1 564 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 CCDC190Q86UF4 302 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 MFSD4AQ8N468 514 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SAMD12Q8N8I0 201 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 ZBTB34Q8NCN2 500 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 BORCS5Q969J3 196 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 USMG5Q96IX5 58 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SPIN2AQ99865 258 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SPIN2BQ9BPZ2 258 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 AIFM2Q9BRQ8 373 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 ELOVL1Q9BW60 279 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 TINAGL1Q9GZM7 467 aaPredicted RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 RANGRFQ9HD47 186 aaPredicted RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 ADAM30Q9UKF2 790 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 ZNF256Q9Y2P7 627 aaPredicted RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 BRI3O95415 125 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 HRASP01112 189 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 FCER2P06734 321 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 ZP3P21754 424 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 PPP5CP53041 499 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SSBP2P81877 361 aaPredicted RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 SPANXN2Q5MJ10 180 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SLC25A42Q86VD7 318 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 OR5AP2Q8NGF4 316 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SRSF12Q8WXF0 261 aaKnown RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 OR4C12Q96R67 309 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 PRR25Q96S07 402 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms