RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 TMEM50BP56557 158 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 SFXN4Q6P4A7 337 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 Q8N402 240 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 FAM89BQ8N5H3 189 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 GFI1Q99684 422 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
CCDC57-219ENST00000584717 PECRQ9BY49 303 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 PLEKHA3Q9HB20 300 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 PLGRKTQ9HBL7 147 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 HSF4Q9ULV5 492 aa12.59□□□□□ -0.39
CCDC57-219ENST00000584717 IFITM5A6NNB3 132 aa12.58□□□□□ -0.4
CCDC57-219ENST00000584717 TRDCB7Z8K6 153 aa12.58□□□□□ -0.4
CCDC57-219ENST00000584717 IDNKQ5T6J7 187 aa12.58□□□□□ -0.4
CCDC57-219ENST00000584717 LINC00299Q6ZSB3 139 aa12.58□□□□□ -0.4
CCDC57-219ENST00000584717 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
CCDC57-219ENST00000584717 TMEM68Q96MH6 324 aa12.58□□□□□ -0.4
CCDC57-219ENST00000584717 PHB2Q99623 299 aa12.58□□□□□ -0.4
CCDC57-219ENST00000584717 SLIRPQ9GZT3 109 aaKnown RBP12.58□□□□□ -0.4
CCDC57-219ENST00000584717 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
CCDC57-219ENST00000584717 OR2D2Q9H210 308 aa12.58□□□□□ -0.4
CCDC57-219ENST00000584717 SLC17A2O00624 439 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 BET1O15155 118 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 SHOXO15266 292 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 BRI3O95415 125 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 SCAND1P57086 179 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 OR10A3P58181 314 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 USMG5Q96IX5 58 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 HIPK2Q9H2X6 1198 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 SDHAF2Q9NX18 166 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 SIGLEC8Q9NYZ4 499 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 DAPK2Q9UIK4 370 aa12.57□□□□□ -0.4
CCDC57-219ENST00000584717 A0A0B4J203 849 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 SMIM30A4D0T7 59 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 MSGN1A6NI15 193 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 SRRM4A7MD48 611 aaKnown RBP12.56□□□□□ -0.4
CCDC57-219ENST00000584717 OR2A4O95047 310 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 S100A5P33763 92 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 CLDN12P56749 244 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 CD81P60033 236 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 CBX3Q13185 183 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 RAB11BQ15907 218 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 MRGPRG-AS1Q2M3A8 158 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 IGSF11Q5DX21 431 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 PLAC9Q5JTB6 97 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 NR2C2APQ86WQ0 139 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 ADAD2Q8NCV1 583 aaKnown RBP12.56□□□□□ -0.4
CCDC57-219ENST00000584717 OR4A4PQ8NGN8 299 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
CCDC57-219ENST00000584717 BMPR1BO00238 502 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 FABP7O15540 132 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 PRH1P02810 166 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 MECP2P51608 486 aaKnown RBP12.55□□□□□ -0.4
CCDC57-219ENST00000584717 EXOSC2Q13868 293 aaKnown RBP12.55□□□□□ -0.4
CCDC57-219ENST00000584717 TNXAQ16473 311 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 RTL8BQ17RB0 113 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
CCDC57-219ENST00000584717 TMEM177Q53S58 311 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 HES5Q5TA89 166 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 LINC00322Q6ZN03 302 aaPredicted RBP12.55□□□□□ -0.4
CCDC57-219ENST00000584717 IDO2Q6ZQW0 420 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 CMTM3Q96MX0 182 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 NEURL2Q9BR09 285 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 C6orf62Q9GZU0 229 aaPredicted RBP12.55□□□□□ -0.4
CCDC57-219ENST00000584717 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 PEMTQ9UBM1 199 aa12.55□□□□□ -0.4
CCDC57-219ENST00000584717 MPPED1O15442 326 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 TPPPO94811 219 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 OR9G9P0C7N8 305 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 RHOGP84095 191 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 PLA2G7Q13093 441 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 OR56B1Q8NGI3 324 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 OR2K2Q8NGT1 345 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 FAM3DQ96BQ1 224 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 CABLES2Q9BTV7 478 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 AKIP1Q9NQ31 210 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 COMMD3Q9UBI1 195 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
CCDC57-219ENST00000584717 SPATA2Q9UM82 520 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 ETV7Q9Y603 341 aa12.54□□□□□ -0.4
CCDC57-219ENST00000584717 RGS5O15539 181 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 FCGR3AP08637 254 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 CD7P09564 240 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 GSTT2P0CG29 244 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 GSTT2BP0CG30 244 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 MRPS15P82914 257 aaKnown RBP12.53□□□□□ -0.4
CCDC57-219ENST00000584717 PRSS8Q16651 343 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 VMA21Q3ZAQ7 101 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 OR10J5Q8NHC4 309 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 DYNLRB2Q8TF09 96 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
CCDC57-219ENST00000584717 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 TSC22D3Q99576 134 aa12.53□□□□□ -0.4
CCDC57-219ENST00000584717 RBM7Q9Y580 266 aaKnown RBP12.53□□□□□ -0.4
CCDC57-219ENST00000584717 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms