RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 DNAH11Q96DT5 4516 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 BRI3O95415 125 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 CRYZL1O95825 349 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 AADACP22760 399 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 SCAND1P57086 179 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 GNG2P59768 71 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 UBE2KP61086 200 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 SSBP2P81877 361 aaPredicted RBP8.54□□□□□ -1.04
CCDC47-206ENST00000584112 PJVKQ0ZLH3 352 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 SFXN4Q6P4A7 337 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 ZNF645Q8N7E2 425 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 OR5T1Q8NG75 326 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 OSR1Q8TAX0 266 aaPredicted RBP8.54□□□□□ -1.04
CCDC47-206ENST00000584112 PHB2Q99623 299 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 ST6GALNAC5Q9BVH7 336 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 ZMAT4Q9H898 229 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 DAPK2Q9UIK4 370 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 MRPS7Q9Y2R9 242 aaKnown RBP8.54□□□□□ -1.04
CCDC47-206ENST00000584112 PRELID3BQ9Y3B1 194 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 RRP15Q9Y3B9 282 aaKnown RBP8.54□□□□□ -1.04
CCDC47-206ENST00000584112 OR2W1Q9Y3N9 320 aa8.54□□□□□ -1.04
CCDC47-206ENST00000584112 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 SRRM4A7MD48 611 aaKnown RBP8.53□□□□□ -1.04
CCDC47-206ENST00000584112 LINC00473A8K010 186 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 MPPED1O15442 326 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 ACTL6BO94805 426 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 GP9P14770 177 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 SPNP16150 400 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 CD36P16671 472 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 TNXAQ16473 311 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 CNIH2Q6PI25 160 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 ZNF773Q6PK81 442 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 KCTD9Q7L273 389 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 LGALS14Q8TCE9 139 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 USMG5Q96IX5 58 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 TINAGL1Q9GZM7 467 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-206ENST00000584112 RHBDL2Q9NX52 303 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 COA4Q9NYJ1 87 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 ELF5Q9UKW6 265 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-206ENST00000584112 ETV7Q9Y603 341 aa8.53□□□□□ -1.04
CCDC47-206ENST00000584112 TMEM235A6NFC5 223 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 HLA-DQB1P01920 261 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 PRSS8Q16651 343 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 ANKRD13BQ86YJ7 626 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 NUDCD2Q8WVJ2 157 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 SRSF12Q8WXF0 261 aaKnown RBP8.52□□□□□ -1.05
CCDC47-206ENST00000584112 ACOT12Q8WYK0 555 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 HSD17B10Q99714 261 aaKnown RBP8.52□□□□□ -1.05
CCDC47-206ENST00000584112 DCUN1D5Q9BTE7 237 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 OR51E2Q9H255 320 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 ANXA10Q9UJ72 324 aa8.52□□□□□ -1.05
CCDC47-206ENST00000584112 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
CCDC47-206ENST00000584112 A0A0A6YYH2 397 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 ANKRD34BA5PLL1 514 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 MSGN1A6NI15 193 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 A6NJ64 397 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 J3QRK9 145 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 FCGR3BO75015 233 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 TMEM127O75204 238 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 DEDDO75618 318 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 TUSC2O75896 110 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 OR9G9P0C7N8 305 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 NFYAP23511 347 aaPredicted RBP8.51□□□□□ -1.05
CCDC47-206ENST00000584112 SDC2P34741 201 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 MXD1Q05195 221 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 CDK10Q15131 360 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 ZNF343Q6P1L6 599 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 IDO2Q6ZQW0 420 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 MMD2Q8IY49 270 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 SPIN2AQ99865 258 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 SPIN2BQ9BPZ2 258 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 RSRP1Q9BUV0 290 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 PEF1Q9UBV8 284 aaKnown RBP8.51□□□□□ -1.05
CCDC47-206ENST00000584112 RBMX2Q9Y388 322 aaKnown RBP8.51□□□□□ -1.05
CCDC47-206ENST00000584112 VPS13DQ5THJ4 4388 aa8.51□□□□□ -1.05
CCDC47-206ENST00000584112 LOC100506127A0A0U1RQW1 187 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 FAM223BA6NKX1 122 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 SSX5O60225 188 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 IGLV1-51P01701 117 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 SAA1P0DJI8 122 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-206ENST00000584112 APELAP0DMC3 54 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 ARPC4P59998 168 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 KLF5Q13887 457 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-206ENST00000584112 MRGPRG-AS1Q2M3A8 158 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 IDNKQ5T6J7 187 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 SLC25A42Q86VD7 318 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 FAM223AQ8IWN6 122 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 ADAD2Q8NCV1 583 aaKnown RBP8.5□□□□□ -1.05
CCDC47-206ENST00000584112 OR4S2Q8NH73 311 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 VSTM2AQ8TAG5 236 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 TCTEX1D2Q8WW35 142 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 SNAPC3Q92966 411 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 ZNF430Q9H8G1 570 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-206ENST00000584112 FAT2Q9NYQ8 4349 aa8.5□□□□□ -1.05
CCDC47-206ENST00000584112 TRAV18A0A075B6X5 111 aa8.49□□□□□ -1.05
CCDC47-206ENST00000584112 IGKV1D-13A0A0B4J2D9 117 aa8.49□□□□□ -1.05
CCDC47-206ENST00000584112 IGKV1-13P0DP09 117 aa8.49□□□□□ -1.05
CCDC47-206ENST00000584112 KIR2DS2P43631 304 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms