RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 MOB3AQ96BX8 217 aa12.21□□□□□ -0.45
SKA2-209ENST00000583976 FXYD6Q9H0Q3 95 aa12.21□□□□□ -0.45
SKA2-209ENST00000583976 PLSCR3Q9NRY6 295 aa12.21□□□□□ -0.45
SKA2-209ENST00000583976 TAS2R8Q9NYW2 309 aa12.21□□□□□ -0.45
SKA2-209ENST00000583976 LSM4Q9Y4Z0 139 aaKnown RBP12.21□□□□□ -0.45
SKA2-209ENST00000583976 SEC14L6B5MCN3 397 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 CD74P04233 296 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 IGKV1-16P04430 117 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 ECI1P42126 302 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 RPS16P62249 146 aaKnown RBP12.2□□□□□ -0.46
SKA2-209ENST00000583976 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
SKA2-209ENST00000583976 DCTN2Q13561 401 aaKnown RBP12.2□□□□□ -0.46
SKA2-209ENST00000583976 SCGB2B2Q4G0G5 96 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 OR2B11Q5JQS5 317 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 ZNF818PQ6ZRF7 136 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 KCTD9Q7L273 389 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 STARD9Q9P2P6 4700 aa12.2□□□□□ -0.46
SKA2-209ENST00000583976 ANKRD20A5PA0PJZ0 165 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 AKAIN1P0CW23 69 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 TBPP20226 339 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.461e-9■■■■■ 38.2
SKA2-209ENST00000583976 GNRHRP30968 328 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 FOXE3Q13461 319 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 FHL3Q13643 280 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 ASPHD1Q5U4P2 390 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 PDPNQ86YL7 162 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 FAM71E2Q8N5Q1 922 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 RNF152Q8N8N0 203 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 OR8H1Q8NGG4 311 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 OR5M8Q8NGP6 311 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 TCTEX1D2Q8WW35 142 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 FLYWCH2Q96CP2 140 aaKnown RBP12.19□□□□□ -0.46
SKA2-209ENST00000583976 ADTRPQ96IZ2 230 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 SRRQ9GZT4 340 aa12.19□□□□□ -0.46
SKA2-209ENST00000583976 ZNF107Q9UII5 783 aaPredicted RBP12.19□□□□□ -0.46
SKA2-209ENST00000583976 EPPK1P58107 5090 aaKnown RBP12.19□□□□□ -0.46
SKA2-209ENST00000583976 NBR2O15453 112 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 FCGR3BO75015 233 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 CBX3Q13185 183 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 EIF4EBP1Q13541 118 aaPredicted RBP12.18□□□□□ -0.46
SKA2-209ENST00000583976 RTL8BQ17RB0 113 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 C9orf66Q5T8R8 295 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 AADACL3Q5VUY0 350 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 ARRDC1Q8N5I2 433 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 ZBTB34Q8NCN2 500 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 OR4C16Q8NGL9 310 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 DDB2Q92466 427 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 HSD17B10Q99714 261 aaKnown RBP12.18□□□□□ -0.46
SKA2-209ENST00000583976 GNB4Q9HAV0 340 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 KIAA1456Q9P272 454 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 PRELID3BQ9Y3B1 194 aa12.18□□□□□ -0.46
SKA2-209ENST00000583976 DISC1C4P0D8 188 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 RAMP3O60896 148 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 CRYZL1O95825 349 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 IGHG4P01861 327 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 ZNF735P0CB33 412 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 PGAM2P15259 253 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 VDAC1P21796 283 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
SKA2-209ENST00000583976 PPP5CP53041 499 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
SKA2-209ENST00000583976 MEF2DQ14814 521 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 PLGLAQ15195 96 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 ZNF66Q6ZN08 573 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 TOMM5Q8N4H5 51 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 OR51H1Q8NH63 302 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 C4orf3Q8WVX3 66 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 TRIM63Q969Q1 353 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 FBXL15Q9H469 300 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 MCUBQ9NWR8 336 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 PTTG2Q9NZH5 202 aa12.17□□□□□ -0.46
SKA2-209ENST00000583976 GPR31O00270 319 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 SHOXO15266 292 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 RLN1P04808 185 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 ELANEP08246 267 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 RRASP10301 218 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 PSMB8P28062 276 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 PSG5Q15238 335 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 MSMO1Q15800 293 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 BAK1Q16611 211 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 ZNF57Q68EA5 555 aaPredicted RBP12.16□□□□□ -0.46
SKA2-209ENST00000583976 LPCAT3Q6P1A2 487 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 LHFPL1Q86WI0 220 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 NPBQ8NG41 125 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 TERB2Q8NHR7 220 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 BORCS5Q969J3 196 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 HARBI1Q96MB7 349 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 OR5B12Q96R08 314 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 CLCC1Q96S66 551 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 RNF5Q99942 180 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 KLK15Q9H2R5 256 aa12.16□□□□□ -0.46
SKA2-209ENST00000583976 METTL1Q9UBP6 276 aaKnown RBP12.16□□□□□ -0.46
SKA2-209ENST00000583976 G3V318 75 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 RRHO14718 337 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 SLC25A17O43808 307 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 PGLYRP1O75594 196 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms