RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 A0A1W2PPQ1 181 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 UBE2QL1A1L167 161 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 OR4C45A6NMZ5 311 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 C15orf62A8K5M9 175 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 M0R1X1 148 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 NDUFA4O00483 81 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 CYB5BO43169 146 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 PRKYO43930 277 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 PROP1O75360 226 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 CD2P06729 351 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 DEFA4P12838 97 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 NANOS3P60323 173 aaKnown RBP4.49□□□□□ -1.69
NUP85-221ENST00000583548 NUTF2P61970 127 aaKnown RBP4.49□□□□□ -1.69
NUP85-221ENST00000583548 SNRPGP62308 76 aaKnown RBP4.49□□□□□ -1.69
NUP85-221ENST00000583548 PPP3R1P63098 170 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 TMED1Q13445 227 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 ATP6AP1Q15904 470 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 KLK9Q2XQG4 91 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 SPSB3Q6PJ21 355 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 MOB1BQ7L9L4 216 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
NUP85-221ENST00000583548 OSR1Q8TAX0 266 aaPredicted RBP4.49□□□□□ -1.69
NUP85-221ENST00000583548 PTX4Q96A99 478 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 CMTM5Q96DZ9 223 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 MRPL48Q96GC5 212 aaKnown RBP4.49□□□□□ -1.69
NUP85-221ENST00000583548 FANCD2OSQ96PS1 177 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 OR14A2Q96R54 314 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 ATP6V0BQ99437 205 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 NIPSNAP3BQ9BS92 247 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 C20orf24Q9BUV8 137 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 C11orf54Q9H0W9 315 aaPredicted RBP4.49□□□□□ -1.69
NUP85-221ENST00000583548 TMEM138Q9NPI0 162 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 FGFR1OP2Q9NVK5 253 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 SMPXQ9UHP9 88 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 KLK9Q9UKQ9 250 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 PUS1Q9Y606 427 aaKnown RBP eCLIP4.49□□□□□ -1.69
NUP85-221ENST00000583548 S4R3C0 116 aa4.49□□□□□ -1.69
NUP85-221ENST00000583548 TRAV2A0A0B4J234 112 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 IGHV3-35A0A0C4DH35 117 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 SMIM9A6NGZ8 99 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 TMEM212A6NML5 194 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 GNGT2O14610 69 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 PDCD6O75340 191 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 CST1P01037 141 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 CRYGCP07315 174 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 GIG44P09565 113 aaPredicted RBP4.48□□□□□ -1.69
NUP85-221ENST00000583548 HTN3P15516 51 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 GNRHRP30968 328 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 CEACAM6P40199 344 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 DEFB131AP59861 70 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 ERVFC1-1P60608 527 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 CDK10Q15131 360 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 DDI2Q5TDH0 399 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 TMEM88Q6PEY1 159 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 GSG1LQ6UXU4 331 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 SSX9Q7RTT3 188 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 CEACAM19Q7Z692 300 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 ZNF502Q8TBZ5 544 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 BSCL2Q96G97 398 aaPredicted RBP4.48□□□□□ -1.69
NUP85-221ENST00000583548 ADTRPQ96IZ2 230 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 RNF2Q99496 336 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 THTPAQ9BU02 230 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 RIBC2Q9H4K1 309 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 ZNF430Q9H8G1 570 aaPredicted RBP4.48□□□□□ -1.69
NUP85-221ENST00000583548 ISG20L2Q9H9L3 353 aaKnown RBP4.48□□□□□ -1.69
NUP85-221ENST00000583548 MGAT4AQ9UM21 535 aa4.48□□□□□ -1.69
NUP85-221ENST00000583548 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 IGKV3-7A0A075B6H7 116 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 IGLV11-55A0A075B6I3 123 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 TRBV5-7A0A0A0MS05 114 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 A0A1W2PP11 408 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 MFSD2BA6NFX1 497 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 HMX3A6NHT5 357 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 SRRM4A7MD48 611 aaKnown RBP4.47□□□□□ -1.69
NUP85-221ENST00000583548 DNASE2O00115 360 aaPredicted RBP4.47□□□□□ -1.69
NUP85-221ENST00000583548 CHEK1O14757 476 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 SLC16A6O15403 523 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 EIF4EP06730 217 aaKnown RBP4.47□□□□□ -1.69
NUP85-221ENST00000583548 RPA2P15927 270 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 C4BPBP20851 252 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 PTBP1P26599 531 aaKnown RBP eCLIP4.47□□□□□ -1.69
NUP85-221ENST00000583548 MAS1LP35410 378 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 RPL27AP46776 148 aaKnown RBP4.47□□□□□ -1.69
NUP85-221ENST00000583548 ALDH3B2P48448 385 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 PSMD7P51665 324 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 EFNB1P98172 346 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 ZNF85Q03923 595 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 MRPL28Q13084 256 aaKnown RBP4.47□□□□□ -1.69
NUP85-221ENST00000583548 PLA2G7Q13093 441 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 USF2Q15853 346 aaPredicted RBP4.47□□□□□ -1.69
NUP85-221ENST00000583548 LEMD1Q68G75 181 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 IDO2Q6ZQW0 420 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 SVOPQ8N4V2 548 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 TMEM116Q8NCL8 245 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 CSNK1G2-AS1Q8NCQ2 148 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 OR5AK2Q8NH90 309 aa4.47□□□□□ -1.69
NUP85-221ENST00000583548 VSTM2AQ8TAG5 236 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms