RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 DHRS11Q6UWP2 260 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 ETV3LQ6ZN32 361 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 ZNF818PQ6ZRF7 136 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 LYSMD2Q8IV50 215 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 TEX45Q8NA69 505 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 MINDY2Q8NBR6 621 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 CASTOR1Q8WTX7 329 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 BORCS5Q969J3 196 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 DUX3Q96PT4 197 aa9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 C6orf62Q9GZU0 229 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-218ENST00000582955 CCL24O00175 119 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 SOX15O60248 233 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 CREBL2O60519 120 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 ACTL6BO94805 426 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 CD40LGP29965 261 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 MYCNOSP40205 109 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 KIR2DS2P43631 304 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 RAB9AP51151 201 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 RAB25P57735 213 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 SSBP2P81877 361 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 TNXAQ16473 311 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 PRSS8Q16651 343 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 OXLD1Q5BKU9 147 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 SAMD5Q5TGI4 173 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 AADACL3Q5VUY0 350 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 MRPL41Q8IXM3 137 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 VKORC1L1Q8N0U8 176 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 SPAG16Q8N0X2 631 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 LINC00482Q8N8I6 264 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 OR5M8Q8NGP6 311 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 OR51H1Q8NH63 302 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 OR52I2Q8NH67 350 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 C15orf40Q8WUR7 153 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 C4orf3Q8WVX3 66 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 MOB3AQ96BX8 217 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 OR5B12Q96R08 314 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 ABHD1Q96SE0 405 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 PHB2Q99623 299 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 FXYD6Q9H0Q3 95 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 KLK11Q9UBX7 282 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 CEPT1Q9Y6K0 416 aa9.83□□□□□ -0.84
SMARCE1-218ENST00000582955 M0QYG6 137 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 TPPPO94811 219 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 IGLL1P15814 213 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 GNRHRP30968 328 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 PYHIN1Q6K0P9 492 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 ZNF491Q8N8L2 437 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 POC5Q8NA72 575 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 WFDC9Q8NEX5 89 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 MYOZ3Q8TDC0 251 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 FCAMRQ8WWV6 532 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 DIRAS2Q96HU8 199 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 UBE2E2Q96LR5 201 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 MS4A10Q96PG2 267 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 ZNF430Q9H8G1 570 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 GNB4Q9HAV0 340 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 ZNF355PQ9NSJ1 428 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 VSIG4Q9Y279 399 aa9.82□□□□□ -0.84
SMARCE1-218ENST00000582955 MEGF8Q7Z7M0 2845 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 MPPED1O15442 326 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 RAMP3O60896 148 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 HRASP01112 189 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 RLN1P04808 185 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 IFNA6P05013 189 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 APELAP0DMC3 54 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 BRWD1-AS2P59051 145 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 TPPP2P59282 170 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 IL18Q14116 193 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 MRGPRG-AS1Q2M3A8 158 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 BEAN1Q3B7T3 259 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 RNASE10Q5GAN6 216 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 SSX9Q7RTT3 188 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 MMD2Q8IY49 270 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 CMTM1Q8IZ96 169 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 OR5T1Q8NG75 326 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 MCFD2Q8NI22 146 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 VSTM2AQ8TAG5 236 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 SRSF12Q8WXF0 261 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 RHOVQ96L33 236 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 P2RX4Q99571 388 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 SLIRPQ9GZT3 109 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 MTFP1Q9UDX5 166 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 NOTCH1P46531 2555 aa9.81□□□□□ -0.84
SMARCE1-218ENST00000582955 MSGN1A6NI15 193 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 GABARAPH6UMI1 98 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 GPR31O00270 319 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 KBTBD11O94819 623 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 OR2A4O95047 310 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 TRGV3P03979 118 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 CD3DP04234 171 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 S100GP29377 79 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 MRPS10P82664 201 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 DGCR2P98153 550 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 KIAA0141Q14154 515 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 PHLDA2Q53GA4 152 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 VAX1Q5SQQ9 334 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 C10orf55Q5SWW7 151 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 LPCAT3Q6P1A2 487 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 RCC1LQ96I51 464 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms