RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 Q8N6K4 173 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 UXS1Q8NBZ7 420 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 OR5M8Q8NGP6 311 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 ASB13Q8WXK3 278 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 RRNAD1Q96FB5 475 aaKnown RBP9.64□□□□□ -0.87
CCDC57-216ENST00000582885 RHOVQ96L33 236 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
CCDC57-216ENST00000582885 MGAT4CQ9UBM8 478 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 MMP24Q9Y5R2 645 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 HIVEP2P31629 2446 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 PLXNB1O43157 2135 aa9.64□□□□□ -0.87
CCDC57-216ENST00000582885 IGHV3-72A0A0B4J1Y9 119 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 ADAP1O75689 374 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 SPDEFO95238 335 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 KRASP01116 189 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 SNRNP70P08621 437 aaKnown RBP9.63□□□□□ -0.87
CCDC57-216ENST00000582885 IL6RP08887 468 aaPredicted RBP9.63□□□□□ -0.87
CCDC57-216ENST00000582885 FGF2P09038 288 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 HOXB5P09067 269 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 AKR1C2P52895 323 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 RPS16P62249 146 aaKnown RBP9.63□□□□□ -0.87
CCDC57-216ENST00000582885 SRSF4Q08170 494 aaKnown RBP9.63□□□□□ -0.87
CCDC57-216ENST00000582885 C2orf68Q2NKX9 166 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 GGNBP1Q5YKI7 109 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 GSG1LQ6UXU4 331 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 OR11H7Q8NGC8 314 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 OR8H1Q8NGG4 311 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 VSTM2AQ8TAG5 236 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 EAF1Q96JC9 268 aaPredicted RBP9.63□□□□□ -0.87
CCDC57-216ENST00000582885 HARBI1Q96MB7 349 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 SPIN2AQ99865 258 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 SPIN2BQ9BPZ2 258 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 COA4Q9NYJ1 87 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 BET1LQ9NYM9 111 aa9.63□□□□□ -0.87
CCDC57-216ENST00000582885 A0A1B0GU03 582 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 SRRM4A7MD48 611 aaKnown RBP9.62□□□□□ -0.87
CCDC57-216ENST00000582885 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 GOSR2O14653 212 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 OR2A4O95047 310 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 IGKV1D-33P01593 117 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 IGKV1-33P01594 117 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 IGLV2-23P01705 113 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 CXCL3P19876 107 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 PAX6P26367 422 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 G6PCP35575 357 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 UBE2KP61086 200 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 CYCSP99999 105 aaKnown RBP9.62□□□□□ -0.87
CCDC57-216ENST00000582885 SCGB2A2Q13296 93 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 DEFB112Q30KQ8 113 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 CLEC9AQ6UXN8 241 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 H2BFWTQ7Z2G1 175 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 PUSL1Q8N0Z8 303 aaKnown RBP9.62□□□□□ -0.87
CCDC57-216ENST00000582885 BCL6BQ8N143 479 aaPredicted RBP9.62□□□□□ -0.87
CCDC57-216ENST00000582885 TEX45Q8NA69 505 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 DMBX1Q8NFW5 382 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 NPBQ8NG41 125 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 OR4A5Q8NH83 315 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 RNASE11Q8TAA1 199 aaKnown RBP9.62□□□□□ -0.87
CCDC57-216ENST00000582885 PIFOQ8TCI5 191 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 GPR146Q96CH1 333 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 C2orf50Q96LR7 162 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 OR2A7Q96R45 310 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 SSX3Q99909 188 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 SMR3AQ99954 134 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 CACFD1Q9UGQ2 172 aa9.62□□□□□ -0.87
CCDC57-216ENST00000582885 NDUFA3O95167 84 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 CRYGBP07316 175 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 SRP14P37108 136 aaKnown RBP9.61□□□□□ -0.87
CCDC57-216ENST00000582885 H2BFSP57053 126 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 SMCO1Q147U7 214 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 VMA21Q3ZAQ7 101 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 AARDQ4LEZ3 155 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 OR4A47Q6IF82 309 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 Q6YL49 198 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 TMEM167AQ8TBQ9 72 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 RITA1Q96K30 269 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 OR10C1Q96KK4 312 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 NMES1Q9C002 83 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 ZNF436Q9C0F3 470 aaPredicted RBP9.61□□□□□ -0.87
CCDC57-216ENST00000582885 PLSCR3Q9NRY6 295 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 TMEM140Q9NV12 185 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 C1RLQ9NZP8 487 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 CDC42EP3Q9UKI2 254 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 SOX21Q9Y651 276 aaPredicted RBP9.61□□□□□ -0.87
CCDC57-216ENST00000582885 F8P00451 2351 aa9.61□□□□□ -0.87
CCDC57-216ENST00000582885 MTORP42345 2549 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 A0A0G2JRQ6 117 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 C13orf42A0A1B0GVH6 325 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 C5orf51A6NDU8 294 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 MPTX1A8MV57 137 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 UPK2O00526 184 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 CCSO14618 274 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 NBR2O15453 112 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 PITX3O75364 302 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 KBTBD11O94819 623 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 GIPP09681 153 aaPredicted RBP9.6□□□□□ -0.87
CCDC57-216ENST00000582885 SAA1P0DJI8 122 aaPredicted RBP9.6□□□□□ -0.87
CCDC57-216ENST00000582885 TMEM11P17152 192 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 IER3P46695 156 aa9.6□□□□□ -0.87
CCDC57-216ENST00000582885 RAP2BP61225 183 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms