RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 IGLV1-51P01701 117 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 TRBV12-3P01733 135 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 SAA1P0DJI8 122 aaPredicted RBP15.66■□□□□ 0.1
SHMT1-209ENST00000582653 ZP3P21754 424 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 DYRK1AQ13627 763 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 IDNKQ5T6J7 187 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 KCTD9Q7L273 389 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 SRSF12Q8WXF0 261 aaKnown RBP15.66■□□□□ 0.1
SHMT1-209ENST00000582653 ZMAT4Q9H898 229 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 ZNF430Q9H8G1 570 aaPredicted RBP15.66■□□□□ 0.1
SHMT1-209ENST00000582653 ADAM30Q9UKF2 790 aa15.66■□□□□ 0.1
SHMT1-209ENST00000582653 DNAH7Q8WXX0 4024 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 TRAV18A0A075B6X5 111 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 PRH1P02810 166 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 PTHLHP12272 177 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 CD36P16671 472 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 AADACP22760 399 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 KLF5Q13887 457 aaPredicted RBP15.65■□□□□ 0.1
SHMT1-209ENST00000582653 C10orf55Q5SWW7 151 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 ZNF343Q6P1L6 599 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 ANKRD13BQ86YJ7 626 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 VKORC1L1Q8N0U8 176 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 Q8N1Y9 231 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 ADAD2Q8NCV1 583 aaKnown RBP15.65■□□□□ 0.1
SHMT1-209ENST00000582653 MUC7Q8TAX7 377 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 SLC25A38Q96DW6 304 aa15.65■□□□□ 0.1
SHMT1-209ENST00000582653 PEF1Q9UBV8 284 aaKnown RBP15.65■□□□□ 0.1
SHMT1-209ENST00000582653 MPPED1O15442 326 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 FCER2P06734 321 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 OR9G9P0C7N8 305 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 SYNJ2BPP57105 145 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 CDK10Q15131 360 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 GVQW1Q8N7I0 195 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 GPHA2Q96T91 129 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 SPATA2Q9UM82 520 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 PRELID3BQ9Y3B1 194 aa15.64■□□□□ 0.09
SHMT1-209ENST00000582653 A8MZ25 164 aa15.63■□□□□ 0.09
SHMT1-209ENST00000582653 BRWD1-AS2P59051 145 aa15.63■□□□□ 0.09
SHMT1-209ENST00000582653 CASC10Q5T4H9 136 aa15.63■□□□□ 0.09
SHMT1-209ENST00000582653 IL34Q6ZMJ4 242 aa15.63■□□□□ 0.09
SHMT1-209ENST00000582653 TCTEX1D2Q8WW35 142 aa15.63■□□□□ 0.09
SHMT1-209ENST00000582653 USMG5Q96IX5 58 aa15.63■□□□□ 0.09
SHMT1-209ENST00000582653 STAB2Q8WWQ8 2551 aa15.63■□□□□ 0.09
SHMT1-209ENST00000582653 SLC22A5O76082 557 aa15.62■□□□□ 0.09
SHMT1-209ENST00000582653 ACTL6BO94805 426 aa15.62■□□□□ 0.09
SHMT1-209ENST00000582653 EIF4EBP1Q13541 118 aaPredicted RBP15.62■□□□□ 0.09
SHMT1-209ENST00000582653 BEST4Q8NFU0 473 aa15.62■□□□□ 0.09
SHMT1-209ENST00000582653 OR9G4Q8NGQ1 327 aa15.62■□□□□ 0.09
SHMT1-209ENST00000582653 TAS2R8Q9NYW2 309 aa15.62■□□□□ 0.09
SHMT1-209ENST00000582653 MRPS7Q9Y2R9 242 aaKnown RBP15.62■□□□□ 0.09
SHMT1-209ENST00000582653 ETV7Q9Y603 341 aa15.62■□□□□ 0.09
SHMT1-209ENST00000582653 IGHV4-30-4P0DP06 118 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 TGFBR1P36897 503 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 RHOGP84095 191 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 ZNF45Q02386 682 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 TATDN3Q17R31 274 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 MMD2Q8IY49 270 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 MFSD4AQ8N468 514 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 HSD17B10Q99714 261 aaKnown RBP15.61■□□□□ 0.09
SHMT1-209ENST00000582653 TM2D3Q9BRN9 247 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 AKIP1Q9NQ31 210 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 CCL28Q9NRJ3 127 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 C19orf73Q9NVV2 129 aa15.61■□□□□ 0.09
SHMT1-209ENST00000582653 HMX3A6NHT5 357 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 TNFSF12O43508 249 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 FCGR2CP31995 323 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 SCAND1P57086 179 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 ARPC4P59998 168 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 HOGA1Q86XE5 327 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 SECTM1Q8WVN6 248 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 SPIN2AQ99865 258 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 SPIN2BQ9BPZ2 258 aa15.6■□□□□ 0.09
SHMT1-209ENST00000582653 TRBV9A0A0B4J1U6 114 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 E7EUB6 86 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 H0Y980 276 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 CREBL2O60519 120 aaPredicted RBP15.59■□□□□ 0.09
SHMT1-209ENST00000582653 RPEL1Q2QD12 228 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 KCTD21Q4G0X4 260 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 C19orf35Q6ZS72 473 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 TTC9CQ8N5M4 171 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 OR4S2Q8NH73 311 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 CITED4Q96RK1 184 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 AUNIPQ9H7T9 357 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 SIGLEC8Q9NYZ4 499 aa15.59■□□□□ 0.09
SHMT1-209ENST00000582653 OR2A4O95047 310 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 CSN3P07498 182 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 ATP5G2Q06055 141 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 EXOSC2Q13868 293 aaKnown RBP15.58■□□□□ 0.08
SHMT1-209ENST00000582653 ZNF66Q6ZN08 573 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 SSX9Q7RTT3 188 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 SGPP2Q8IWX5 399 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 PUSL1Q8N0Z8 303 aaKnown RBP15.58■□□□□ 0.08
SHMT1-209ENST00000582653 OR13F1Q8NGS4 319 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 SNAPC3Q92966 411 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 OR2A7Q96R45 310 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 DIABLOQ9NR28 239 aa15.58■□□□□ 0.08
SHMT1-209ENST00000582653 MEIS3P1A6NDR6 274 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 FAM223BA6NKX1 122 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 TEX22C9J3V5 150 aa15.57■□□□□ 0.08
SHMT1-209ENST00000582653 BMPR1BO00238 502 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms