RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 MEF2DQ14814 521 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 BAK1Q16611 211 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 ZNF585BQ52M93 769 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 PPP1R27Q86WC6 154 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 FOXRED2Q8IWF2 684 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 SLC38A6Q8IZM9 456 aa12.88□□□□□ -0.35
RNF43-206ENST00000582293 CITED2Q99967 270 aaPredicted RBP12.88□□□□□ -0.35
RNF43-206ENST00000582293 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
RNF43-206ENST00000582293 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 CATR1Q13166 79 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 CBX3Q13185 183 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 PLGLAQ15195 96 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 SCGB2B2Q4G0G5 96 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 LPCAT3Q6P1A2 487 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 PUSL1Q8N0Z8 303 aaKnown RBP12.87□□□□□ -0.35
RNF43-206ENST00000582293 TEX45Q8NA69 505 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 OR51S1Q8NGJ8 323 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 BORCS5Q969J3 196 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 FAM103A1Q9BTL3 118 aaKnown RBP12.87□□□□□ -0.35
RNF43-206ENST00000582293 PARP11Q9NR21 331 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 SLC2A9Q9NRM0 540 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 SLC2A8Q9NY64 477 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 WSB1Q9Y6I7 421 aa12.87□□□□□ -0.35
RNF43-206ENST00000582293 S1PR2O95136 353 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 IL6RP08887 468 aaPredicted RBP12.86□□□□□ -0.35
RNF43-206ENST00000582293 F2RP25116 425 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 RND3P61587 244 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 PRSS8Q16651 343 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 VMA21Q3ZAQ7 101 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 TBC1D26Q86UD7 250 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 CMTM1Q8IZ96 169 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 HRASLSQ9HDD0 168 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 AKIP1Q9NQ31 210 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 BATF3Q9NR55 127 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 NUBP2Q9Y5Y2 271 aa12.86□□□□□ -0.35
RNF43-206ENST00000582293 TET2Q6N021 2002 aaPredicted RBP12.85□□□□□ -0.35
RNF43-206ENST00000582293 DISC1C4P0D8 188 aa12.85□□□□□ -0.35
RNF43-206ENST00000582293 SOX15O60248 233 aa12.85□□□□□ -0.35
RNF43-206ENST00000582293 PGAM2P15259 253 aa12.85□□□□□ -0.35
RNF43-206ENST00000582293 POU2AF1Q16633 256 aa12.85□□□□□ -0.35
RNF43-206ENST00000582293 GDPD1Q8N9F7 314 aa12.85□□□□□ -0.35
RNF43-206ENST00000582293 MINDY2Q8NBR6 621 aa12.85□□□□□ -0.35
RNF43-206ENST00000582293 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
RNF43-206ENST00000582293 RTBDNQ9BSG5 229 aaPredicted RBP12.85□□□□□ -0.35
RNF43-206ENST00000582293 ZNF430Q9H8G1 570 aaPredicted RBP12.85□□□□□ -0.35
RNF43-206ENST00000582293 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 VWFP04275 2813 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 TRAV41A0A0B4J266 112 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 TSPAN15O95858 294 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 HPRT1P00492 218 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 IGKV1-39P01597 117 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 IGHG4P01861 327 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 IGKV1D-39P04432 117 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 PIGPP57054 158 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 TAS2R31P59538 309 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 FXYD3Q14802 87 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 ASPHD1Q5U4P2 390 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 LCNL1Q6ZST4 164 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 TOMM5Q8N4H5 51 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 TMEM167AQ8TBQ9 72 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 ARPC1AQ92747 370 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 RHOVQ96L33 236 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 C5orf66Q9H5L9 145 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 PLEKHA2Q9HB19 425 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 GPR132Q9UNW8 380 aa12.84□□□□□ -0.35
RNF43-206ENST00000582293 TRAV3A0A0B4J244 114 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 MPPED1O15442 326 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 KBTBD11O94819 623 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 OR2A4O95047 310 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 CTSDP07339 412 aaPredicted RBP12.83□□□□□ -0.36
RNF43-206ENST00000582293 MYOD1P15172 320 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 VDAC1P21796 283 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 PSMB8P28062 276 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 LPAR6P43657 344 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 GNB1P62873 340 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 ZNF45Q02386 682 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 PRR31Q5SQ13 230 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 C10orf55Q5SWW7 151 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 OR4A47Q6IF82 309 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 C18orf65Q6ZTR6 163 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 SSX9Q7RTT3 188 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 RNF152Q8N8N0 203 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 OR2A7Q96R45 310 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 TP53RKQ96S44 253 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 PRRT1Q99946 306 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 PTTG2Q9NZH5 202 aa12.83□□□□□ -0.36
RNF43-206ENST00000582293 A0A1B0GW64 132 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 E7EUB6 86 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 HRASP01112 189 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 RPLP1P05386 114 aaKnown RBP12.82□□□□□ -0.36
RNF43-206ENST00000582293 SLC35B1P78383 322 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 KIAA0141Q14154 515 aaPredicted RBP12.82□□□□□ -0.36
RNF43-206ENST00000582293 SURF2Q15527 256 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms