RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-209ENST00000580095 CDX1P47902 265 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-209ENST00000580095 ADIRFQ15847 76 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 SMIM21Q3B7S5 101 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 SLC35E4Q6ICL7 350 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 SEM1Q6ZVN7 128 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
TOP3A-209ENST00000580095 C22orf15Q8WYQ4 148 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 SNHG12Q9BXW3 62 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 SMDT1Q9H4I9 107 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-209ENST00000580095 DOK5Q9P104 306 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 SPTA1P02549 2419 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 TRAV3A0A0B4J244 114 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 SMCO3A2RU48 225 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 HSBP1L1C9JCN9 74 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 ITGB1BP1O14713 200 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 OR9G9P0C7N8 305 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 COX5AP20674 150 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 HNF1AP20823 631 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 ZNF134P52741 427 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 CD81P60033 236 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 FFAR4Q5NUL3 377 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 MOGAT3Q86VF5 341 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 TGIF2LYQ8IUE0 185 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 OR10D4PQ8NGN7 298 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 AGMATQ9BSE5 352 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 GAR1Q9NY12 217 aaKnown RBP8.72□□□□□ -1.01
TOP3A-209ENST00000580095 ARFGEF3Q5TH69 2177 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 TRAV1-1A0A0B4J248 108 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 TRAV17A0A0B4J275 112 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 PRR33A8MZF0 331 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 TUBG1P23258 451 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 S100A2P29034 98 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 CATR1Q13166 79 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 EIF4EBP1Q13541 118 aaPredicted RBP8.72□□□□□ -1.01
TOP3A-209ENST00000580095 MSMO1Q15800 293 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 C1orf229Q6ZS94 237 aaPredicted RBP8.72□□□□□ -1.01
TOP3A-209ENST00000580095 C22orf34Q6ZV56 151 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 SLC35E3Q7Z769 313 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 OR10G4Q8NGN3 311 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 OR10G9Q8NGN4 311 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 OR10G7Q8NGN6 311 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 SMIM7Q9BQ49 75 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 TMEM204Q9BSN7 226 aa8.72□□□□□ -1.01
TOP3A-209ENST00000580095 ZNF71Q9NQZ8 489 aaPredicted RBP8.72□□□□□ -1.01
TOP3A-209ENST00000580095 CISD1Q9NZ45 108 aaKnown RBP8.72□□□□□ -1.01
TOP3A-209ENST00000580095 TRAV38-1A0A0B4J264 116 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 J3QW42 95 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 K7EM74 188 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 M0R1X1 148 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BKO60814 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BJP06899 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 P0C879 139 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BOP23527 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BBP33778 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BDP58876 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 UBE2G2P60604 165 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BCP62807 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST2H2BEQ16778 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 TMEM95Q3KNT9 176 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.71□□□□□ -1.01
TOP3A-209ENST00000580095 OR10P1Q8NGE3 313 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 MBD3L1Q8WWY6 194 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BHQ93079 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 SARAFQ96BY9 339 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 SDSLQ96GA7 329 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BNQ99877 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 HIST1H2BMQ99879 126 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 PROCRQ9UNN8 238 aa8.71□□□□□ -1.01
TOP3A-209ENST00000580095 C1QTNF9BB2RNN3 333 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 CRYAAP02489 173 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 GPR12P47775 334 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 DPPA3Q6W0C5 159 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 BHLHA15Q7RTS1 189 aaPredicted RBP8.71□□□□□ -1.02
TOP3A-209ENST00000580095 BEND2Q8NDZ0 799 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 OR51G1Q8NGK1 321 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 OR4F5Q8NH21 305 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 Q8TCH9 128 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 OR2V2Q96R30 315 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 OR4F4Q96R69 305 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 PSMG3Q9BT73 122 aaPredicted RBP8.71□□□□□ -1.02
TOP3A-209ENST00000580095 ZNRD1Q9P1U0 126 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 VAX2Q9UIW0 290 aa8.71□□□□□ -1.02
TOP3A-209ENST00000580095 A6NNC1 897 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 SPINT2O43291 252 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 MYOD1P15172 320 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 SERF2P84101 59 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 OR10A7Q8NGE5 316 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 SNIP1Q8TAD8 396 aaKnown RBP8.7□□□□□ -1.02
TOP3A-209ENST00000580095 SNRNP40Q96DI7 357 aaKnown RBP8.7□□□□□ -1.02
TOP3A-209ENST00000580095 MALSU1Q96EH3 234 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 FAM210BQ96KR6 192 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 PATZ1Q9HBE1 687 aaKnown RBP8.7□□□□□ -1.02
TOP3A-209ENST00000580095 BSNQ9UPA5 3926 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 TNCP24821 2201 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 MUC6Q6W4X9 2439 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 PMS2P5A8MQ11 134 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms