RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 DMBX1Q8NFW5 382 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 OR52B4Q8NGK2 314 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
IFT20-207ENST00000578547 R3HDM4Q96D70 268 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 SEC22CQ9BRL7 303 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 TMEM222Q9H0R3 208 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 FBXL15Q9H469 300 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 PLEKHA2Q9HB19 425 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 RAB18Q9NP72 206 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 COMMD9Q9P000 198 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 C9orf170A2RU37 121 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 SRRM4A7MD48 611 aaKnown RBP9.67□□□□□ -0.86
IFT20-207ENST00000578547 INMT-MINDY4F8WBC2 141 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 CLDN34H7C241 214 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 B3GALNT1O75752 331 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 HRASP01112 189 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 KRASP01116 189 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 IGKV1-39P01597 117 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 IGLV2-23P01705 113 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 IGKV1D-39P04432 117 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 RNASE1P07998 156 aaKnown RBP9.67□□□□□ -0.86
IFT20-207ENST00000578547 SAA1P0DJI8 122 aaPredicted RBP9.67□□□□□ -0.86
IFT20-207ENST00000578547 UCP1P25874 307 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 G6PCP35575 357 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 LGALS7P47929 136 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 DHODHQ02127 395 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 DHRS2Q13268 280 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 TMEM187Q14656 261 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 ANKRD55Q3KP44 614 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 VMA21Q3ZAQ7 101 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 TMEM268Q5VZI3 342 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 LIN54Q6MZP7 749 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 C16orf82Q7Z2V1 217 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 LYG2Q86SG7 212 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 ZNF695Q8IW36 515 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 OR8H1Q8NGG4 311 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 LHFPL5Q8TAF8 219 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 GLYATL2Q8WU03 294 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 GALNT14Q96FL9 552 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 RHOVQ96L33 236 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 CLCC1Q96S66 551 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 RNF5Q99942 180 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 RASL11BQ9BPW5 248 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 TPSG1Q9NRR2 321 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 PLSCR3Q9NRY6 295 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 FAM212BQ9NTI7 297 aaPredicted RBP9.67□□□□□ -0.86
IFT20-207ENST00000578547 C1RLQ9NZP8 487 aa9.67□□□□□ -0.86
IFT20-207ENST00000578547 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
IFT20-207ENST00000578547 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 MARCH11A6NNE9 402 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 TRIM77I1YAP6 450 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 RRHO14718 337 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 SPDEFO95238 335 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 NQO2P16083 231 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 AKR1C2P52895 323 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 UBE2KP61086 200 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 C5orf64Q2M2E5 130 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 C9orf152Q5JTZ5 239 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 C5orf56Q8N8D9 126 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 Q8N9W7 124 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 NPBQ8NG41 125 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 ZFAND2BQ8WV99 257 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 TAF15Q92804 592 aaKnown RBP eCLIP9.66□□□□□ -0.86
IFT20-207ENST00000578547 MARVELD1Q9BSK0 173 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 C2CD3Q4AC94 2353 aa9.66□□□□□ -0.86
IFT20-207ENST00000578547 M0QZK8 103 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 NDUFA3O95167 84 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 CDS2O95674 445 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 DHFRP00374 187 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 CRYBA1P05813 215 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 MECP2P51608 486 aaKnown RBP9.65□□□□□ -0.86
IFT20-207ENST00000578547 GNB1P62873 340 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 SRPXP78539 464 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 ARSJQ5FYB0 599 aaPredicted RBP9.65□□□□□ -0.86
IFT20-207ENST00000578547 OR4A47Q6IF82 309 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 SELENOHQ8IZQ5 122 aaKnown RBP9.65□□□□□ -0.86
IFT20-207ENST00000578547 LGI3Q8N145 548 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 FAM71E2Q8N5Q1 922 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 SLC35G3Q8N808 338 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 UXS1Q8NBZ7 420 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 RBPMSQ93062 196 aaKnown RBP9.65□□□□□ -0.86
IFT20-207ENST00000578547 AIFM2Q9BRQ8 373 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 NPFFR1Q9GZQ6 430 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 ALX4Q9H161 411 aaPredicted RBP9.65□□□□□ -0.86
IFT20-207ENST00000578547 TMEM140Q9NV12 185 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 SIGLEC9Q9Y336 463 aa9.65□□□□□ -0.86
IFT20-207ENST00000578547 ATRQ13535 2644 aa9.65□□□□□ -0.87
IFT20-207ENST00000578547 FGF16O43320 207 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 ATG12O94817 140 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 KBTBD11O94819 623 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 OR2A4O95047 310 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 DUS4LO95620 317 aaKnown RBP9.64□□□□□ -0.87
IFT20-207ENST00000578547 IGKV1-5P01602 117 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 AMY1AP04745 511 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 BLCAPP62952 87 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 PJVKQ0ZLH3 352 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 OXA1LQ15070 435 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 IZUMO4Q1ZYL8 232 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 H2BFWTQ7Z2G1 175 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 LYZL2Q7Z4W2 148 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms