RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 CTDSP1Q9GZU7 261 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 HEYLQ9NQ87 328 aaPredicted RBP7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 JKAMPQ9P055 326 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 METTL1Q9UBP6 276 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 FOXA2Q9Y261 457 aaPredicted RBP7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 KIAA2026Q5HYC2 2103 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SAA2-SAA4A0A096LPE2 208 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TRAV3A0A0B4J244 114 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 hADV38S2A0JD32 116 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 DPRXA6NFQ7 191 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PRSS46E5RG02 174 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 AP4M1O00189 453 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TGOLN2O43493 480 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GFRA3O60609 400 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MPDU1O75352 247 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 EIF3GO75821 320 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 KBTBD11O94819 623 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 IGHV2-5P01817 119 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 S100A8P05109 93 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 THBDP07204 575 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SAA2P0DJI9 122 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TNFRSF1AP19438 455 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RPS10P46783 165 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CDC34P49427 236 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MEOX2P50222 304 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RND2P52198 227 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CD81P60033 236 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MEF2BQ02080 365 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 POU2AF1Q16633 256 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM249Q2WGJ8 235 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 UTF1Q5T230 341 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 WDR25Q64LD2 544 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF343Q6P1L6 599 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C1orf229Q6ZS94 237 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CYP2G1PQ6ZSU1 146 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 VKORC1L1Q8N0U8 176 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 LYG1Q8N1E2 194 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CISD2Q8N5K1 135 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 Q8N7P7 452 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF383Q8NA42 475 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OR10A7Q8NGE5 316 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 Q8WTZ3 238 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM242Q9NWH2 141 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 NAT8Q9UHE5 227 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RPUSD1Q9UJJ7 312 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SSUH2Q9Y2M2 353 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF835Q9Y2P0 537 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 LINC00312Q9Y6C7 94 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OTOGLQ3ZCN5 2332 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 VCANP13611 3396 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SPEGQ15772 3267 aa7.69□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RAI1Q7Z5J4 1906 aaPredicted RBP7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SMCO3A2RU48 225 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C17orf100A8MU93 164 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CLDN34H7C241 214 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RRHO14718 337 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 HRASP01112 189 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CXCL1P09341 107 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OR4A8P0C604 315 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OPRK1P41145 380 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GNG10P50151 68 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMPRSS3P57727 454 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 HSPE1P61604 102 aaKnown RBP7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MEF2CQ06413 473 aaPredicted RBP7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GTF3C1Q12789 2109 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ADIPOQQ15848 244 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TBR1Q16650 682 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM241Q24JQ0 296 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF674Q2M3X9 581 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OR4A47Q6IF82 309 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SLC25A48Q6ZT89 311 aaKnown RBP7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C1orf87Q8N0U7 546 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 Q8NA96 180 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 NEIL1Q96FI4 390 aaPredicted RBP7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C12orf57Q99622 126 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMPRSS5Q9H3S3 457 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ENY2Q9NPA8 101 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 KCNIP2Q9NS61 270 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 INTS1Q8N201 2190 aaKnown RBP7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 WDR87Q6ZQQ6 2873 aa7.68□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TGIF2-C20orf24A0A0A6YYL0 155 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TRAV38-1A0A0B4J264 116 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 VSTM5A8MXK1 200 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 UPK2O00526 184 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ATXN7O15265 892 aaPredicted RBP7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 HMGB3O15347 200 aaKnown RBP7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OPN1MWP04001 364 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OPN1MW2P0DN77 364 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OPN1MW3P0DN78 364 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 NDUFB7P17568 137 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 NPY1RP25929 384 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PLA2G5P39877 138 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ERVFRD-1P60508 538 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 BSPH1Q075Z2 132 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 FABP9Q0Z7S8 132 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 KIAA0141Q14154 515 aaPredicted RBP7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RTL8BQ17RB0 113 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms