RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 A0A1W2PPE3 182 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 MED19A0JLT2 244 aaPredicted RBP9.12□□□□□ -0.95
SKA2-204ENST00000578519 C15orf61A6NNL5 157 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 RNASEK-C17orf49H0YIS7 233 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 H7C2Y5 167 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 SIAH2O43255 324 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 MPDU1O75352 247 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 TSPAN9O75954 239 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 IGHV3-7P01780 117 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 CT45A6P0DMU7 189 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 CT45A5P0DMU8 189 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 CT45A7P0DMV0 189 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 PPIAL4GP0DN37 164 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 IGHV1-8P0DP01 117 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 CCL3L1P16619 93 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 LGALS7P47929 136 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 OR2B8PP59922 312 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 RELBQ01201 579 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 OR8G2PQ6IF36 304 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 C11orf71Q6IPW1 123 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 TGIF2LXQ8IUE1 241 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 ODF3L1Q8IXM7 274 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 SVBPQ8N300 66 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 ZNF383Q8NA42 475 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 OR4C13Q8NGP0 309 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 C8orf46Q8TAG6 207 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 QTRT1Q9BXR0 403 aaKnown RBP9.12□□□□□ -0.95
SKA2-204ENST00000578519 WDR61Q9GZS3 305 aaKnown RBP9.12□□□□□ -0.95
SKA2-204ENST00000578519 UNKLQ9H9P5 680 aaKnown RBP9.12□□□□□ -0.95
SKA2-204ENST00000578519 BET1LQ9NYM9 111 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 CTSZQ9UBR2 303 aa9.12□□□□□ -0.95
SKA2-204ENST00000578519 A0A1B0GW64 132 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 F8W036 122 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 UPK2O00526 184 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 MMP23AO75900 390 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 KBTBD11O94819 623 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 APOC3P02656 99 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 OR9G9P0C7N8 305 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 USF1P22415 310 aaPredicted RBP9.11□□□□□ -0.95
SKA2-204ENST00000578519 TAGLN2P37802 199 aaKnown RBP9.11□□□□□ -0.95
SKA2-204ENST00000578519 SNCAP37840 140 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 ZNF137PP52743 207 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 RAB31Q13636 194 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 VMA21Q3ZAQ7 101 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 TMEM177Q53S58 311 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 WDR25Q64LD2 544 aaPredicted RBP9.11□□□□□ -0.95
SKA2-204ENST00000578519 OR4A47Q6IF82 309 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 OR5AN1Q8NGI8 311 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 OR5B3Q8NH48 314 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 TAF15Q92804 592 aaKnown RBP eCLIP9.11□□□□□ -0.95
SKA2-204ENST00000578519 LINC00052Q96N35 136 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 OR4C12Q96R67 309 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 CLEC7AQ9BXN2 247 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 SEC11CQ9BY50 192 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 EIF5A2Q9GZV4 153 aaKnown RBP9.11□□□□□ -0.95
SKA2-204ENST00000578519 PATZ1Q9HBE1 687 aaKnown RBP9.11□□□□□ -0.95
SKA2-204ENST00000578519 TCF19Q9Y242 345 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
SKA2-204ENST00000578519 KIAA2026Q5HYC2 2103 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 A0A1W2PN81 502 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 M0R1W7 72 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 SNAPINO95295 136 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 F12P00748 615 aaPredicted RBP9.1□□□□□ -0.95
SKA2-204ENST00000578519 IFNA1P01562 189 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 CHRNA7P36544 502 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 CEACAM3P40198 252 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 GPR6P46095 362 aaPredicted RBP9.1□□□□□ -0.95
SKA2-204ENST00000578519 DLX6P56179 175 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 RPS16P62249 146 aaKnown RBP9.1□□□□□ -0.95
SKA2-204ENST00000578519 DLK1P80370 383 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 ERHP84090 104 aaKnown RBP9.1□□□□□ -0.95
SKA2-204ENST00000578519 DEFA5Q01523 94 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 CDSNQ15517 529 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 ETV3LQ6ZN32 361 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 CENPVQ7Z7K6 275 aaPredicted RBP9.1□□□□□ -0.95
SKA2-204ENST00000578519 BEND2Q8NDZ0 799 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 SH3BGRL3Q9H299 93 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 PLEKHA3Q9HB20 300 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 TMEM14BQ9NUH8 114 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 OR51B2Q9Y5P1 312 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 KPTNQ9Y664 436 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 A0A0C4DFX4 3053 aa9.1□□□□□ -0.95
SKA2-204ENST00000578519 PRR14LQ5THK1 2151 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 LOC105371242A0A075B767 164 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 IFNA4P05014 189 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 EFNA4P52798 201 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 SUB1P53999 127 aaKnown RBP eCLIP9.09□□□□□ -0.95
SKA2-204ENST00000578519 GUK1Q16774 197 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 ACOT6Q3I5F7 207 aaPredicted RBP9.09□□□□□ -0.95
SKA2-204ENST00000578519 TMEM41BQ5BJD5 291 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 ZNF841Q6ZN19 808 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 C1orf122Q6ZSJ8 110 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 ZNF295-AS1Q8N0V1 137 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 OR1L8Q8NGR8 309 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 HARBI1Q96MB7 349 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 RNF5Q99942 180 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 NABP2Q9BQ15 211 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms