RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RFX2P48378 723 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 LYSMD2Q8IV50 215 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 MFSD4AQ8N468 514 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 TCTEX1D1Q8N7M0 179 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 RNF152Q8N8N0 203 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 OR6F1Q8NGZ6 308 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 DYNC2LI1Q8TCX1 351 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 TCTEX1D2Q8WW35 142 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
VAPA-204ENST00000577901 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
VAPA-204ENST00000577901 SRRM4A7MD48 611 aaKnown RBP12.46□□□□□ -0.41
VAPA-204ENST00000577901 CRYGBP07316 175 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 PSMB8P28062 276 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 CDX1P47902 265 aaPredicted RBP12.46□□□□□ -0.41
VAPA-204ENST00000577901 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.41
VAPA-204ENST00000577901 UBE2KP61086 200 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 RPL30P62888 115 aaKnown RBP12.46□□□□□ -0.41
VAPA-204ENST00000577901 EIF4EBP1Q13541 118 aaPredicted RBP12.46□□□□□ -0.41
VAPA-204ENST00000577901 FXYD3Q14802 87 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 ECSCRQ19T08 205 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 AKIRIN2Q53H80 203 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 C9orf66Q5T8R8 295 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 TEX45Q8NA69 505 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 OR5M8Q8NGP6 311 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 OR4S2Q8NH73 311 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 ARPC1AQ92747 370 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 ISOC1Q96CN7 298 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 PRR25Q96S07 402 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 ZNF2Q9BSG1 426 aaPredicted RBP12.46□□□□□ -0.41
VAPA-204ENST00000577901 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 A3GALT2U3KPV4 340 aa12.46□□□□□ -0.41
VAPA-204ENST00000577901 A0A1W2PN81 502 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 H3BMQ9 156 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 CTDSP2O14595 271 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 TNFSF12O43508 249 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 IGLV1-40P01703 118 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 CD40LGP29965 261 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 HRH1P35367 487 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 CHRNA7P36544 502 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 KIR2DS2P43631 304 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 TSPAN5P62079 268 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 GNB1P62873 340 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 NDPQ00604 133 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 CATR1Q13166 79 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 UNQ5815/PRO19632Q6UWF5 114 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 LCNL1Q6ZST4 164 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 TMEM17Q86X19 198 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 FCAMRQ8WWV6 532 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 MOB3AQ96BX8 217 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 FAM103A1Q9BTL3 118 aaKnown RBP12.45□□□□□ -0.42
VAPA-204ENST00000577901 TPSG1Q9NRR2 321 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
VAPA-204ENST00000577901 FBXO7Q9Y3I1 522 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 HUWE1Q7Z6Z7 4374 aaKnown RBP12.45□□□□□ -0.42
VAPA-204ENST00000577901 DNAH7Q8WXX0 4024 aa12.45□□□□□ -0.42
VAPA-204ENST00000577901 DYNC2H1Q8NCM8 4307 aaKnown RBP12.44□□□□□ -0.42
VAPA-204ENST00000577901 CCDC160A6NGH7 325 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 CREBL2O60519 120 aaPredicted RBP12.44□□□□□ -0.42
VAPA-204ENST00000577901 EGR2P11161 476 aaPredicted RBP12.44□□□□□ -0.42
VAPA-204ENST00000577901 ECI1P42126 302 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 RAB9AP51151 201 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 ACTBL2Q562R1 376 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 PYHIN1Q6K0P9 492 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 LFNGQ8NES3 379 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 ABHD1Q96SE0 405 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 ASCL2Q99929 193 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 AIFM2Q9BRQ8 373 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 MIXL1Q9H2W2 232 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 RABL2AQ9UBK7 228 aaPredicted RBP12.44□□□□□ -0.42
VAPA-204ENST00000577901 RABL2BQ9UNT1 228 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 CEPT1Q9Y6K0 416 aa12.44□□□□□ -0.42
VAPA-204ENST00000577901 SEC14L6B5MCN3 397 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 C3orf84H3BNL1 204 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 ARPC1BO15143 372 aaKnown RBP12.43□□□□□ -0.42
VAPA-204ENST00000577901 ACTL6BO94805 426 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 HRASP01112 189 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 GNRHRP30968 328 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 PJVKQ0ZLH3 352 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 C19orf54Q5BKX5 351 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 RNASE12Q5GAN4 147 aaKnown RBP12.43□□□□□ -0.42
VAPA-204ENST00000577901 LPCAT3Q6P1A2 487 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 ZNF818PQ6ZRF7 136 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 LAX1Q8IWV1 398 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 CMTM1Q8IZ96 169 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 POC5Q8NA72 575 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 GRPEL2Q8TAA5 225 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 VSTM2AQ8TAG5 236 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 UBE2E2Q96LR5 201 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 TMEM68Q96MH6 324 aa12.43□□□□□ -0.42
VAPA-204ENST00000577901 C6orf62Q9GZU0 229 aaPredicted RBP12.43□□□□□ -0.42
VAPA-204ENST00000577901 IFNA6P05013 189 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 MRPS10P82664 201 aaKnown RBP12.42□□□□□ -0.42
VAPA-204ENST00000577901 PRSS8Q16651 343 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 SPAG16Q8N0X2 631 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 OR52I2Q8NH67 350 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 CD300LFQ8TDQ1 290 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms