RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 MZB1Q8WU39 189 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR5P3Q8WZ94 311 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 LEAP2Q969E1 77 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 MRGPRFQ96AM1 343 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM210BQ96KR6 192 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ZDHHC11Q9H8X9 412 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CYB5R1Q9UHQ9 305 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TBL2Q9Y4P3 447 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 MMP24Q9Y5R2 645 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TNFRSF18Q9Y5U5 241 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 DOCK6Q96HP0 2047 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ZGRF1Q86YA3 2104 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 CKAP5Q14008 2032 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV3-49A0A0A0MS15 119 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 RAB19A4D1S5 217 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF701M0R085 212 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PPP1R2P9O14990 202 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PLPP2O43688 288 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV1-46P01743 117 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHMP01871 453 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TTRP02766 147 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 IL4P05112 153 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OR5AC1P0C628 307 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 LINC00869P0C866 280 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 NTF3P20783 257 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OR10J1P30954 320 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ERVS71-1P61550 626 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 CX3CL1P78423 397 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 FABP9Q0Z7S8 132 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 HAGHQ16775 308 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PAPPA-AS1Q5QFB9 102 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 CFAP161Q6P656 301 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 NRARPQ7Z6K4 114 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 MYPOPQ86VE0 399 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF645Q8N7E2 425 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF383Q8NA42 475 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 MRAP2Q96G30 205 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TOLLIPQ9H0E2 274 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 NEU3Q9UQ49 428 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 MYO16Q9Y6X6 1858 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 HEATR1Q9H583 2144 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ARHGEF17Q96PE2 2063 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TRAV14DV4A0A0A6YYC5 116 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 SOCS1O15524 211 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PRSS1P07477 247 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 MELTFP08582 738 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 FCGR3AP08637 254 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OR9G9P0C7N8 305 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TRGC1P0CF51 173 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 RPL35AP18077 110 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OPRL1P41146 370 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 RANP62826 216 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 DGCR2P98153 550 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 MGAT2Q10469 447 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF585BQ52M93 769 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM74A4Q5TZK3 123 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ABLIM2Q6H8Q1 611 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 IGF2-ASQ6U949 168 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PARP16Q8N5Y8 322 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OR2C3Q8N628 320 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 CLRN3Q8NCR9 226 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 AQP3Q92482 292 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 NEU1Q99519 415 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 RSG1Q9BU20 258 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 KLK5Q9Y337 293 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TMSB15BA0A087X1C1 80 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM189A5PLL7 270 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 DPRXA6NFQ7 191 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OR4C45A6NMZ5 311 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 HSBP1O75506 76 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 SIX6O95475 246 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 SFT2D2O95562 160 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 IGF2P01344 180 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PDGFAP04085 211 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 CD1AP06126 327 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PSG2P11465 335 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 CCL3L1P16619 93 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 RPS19P39019 145 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 RHOGP84095 191 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 FABP5Q01469 135 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 HERPUD1Q15011 391 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ASPHD2Q6ICH7 369 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 WDR73Q6P4I2 378 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM219Q86XT9 240 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OR4C16Q8NGL9 310 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 OR5C1Q8NGR4 320 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 CLDND2Q8NHS1 167 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 NOL4LQ96MY1 436 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 ABHD1Q96SE0 405 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PRADC1Q9BSG0 188 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM140Q9NV12 185 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 GAB2Q9UQC2 676 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC25A15Q9Y619 301 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 NCOR2Q9Y618 2525 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 GOLGB1Q14789 3259 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 DUXBA0A1W2PPF3 345 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 PINLYPA6NC86 204 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 MAP1LC3B2A6NCE7 125 aa2.47□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM24AA6NFZ4 105 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms