RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	NANOS1	Q8WY41	292 aa	Known RBP	12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	TECTB	Q96PL2	329 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	FAM103A1	Q9BTL3	118 aa	Known RBP	12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	GPR87	Q9BY21	358 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	NPCDR1	Q9BY65	106 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	PRDM13	Q9H4Q3	707 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	POLDIP2	Q9Y2S7	368 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	PROP1	O75360	226 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	TDGF1	P13385	188 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	ACP1	P24666	158 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	WDR82	Q6UXN9	313 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	CISD1	Q9NZ45	108 aa	Known RBP	12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	DYSF	O75923	2080 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	RNPS1	Q15287	305 aa	Known RBP	12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	SLC35E3	Q7Z769	313 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	MRGPRG	Q86SM5	289 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	NCOR2	Q9Y618	2525 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	PLAU	P00749	431 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR4A8	P0C604	315 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	CDC34	P49427	236 aa	Predicted RBP	12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	C11orf53	Q8IXP5	236 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	LINC00469	Q8N7U9	141 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR4A16	Q8NH70	328 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	LINC00470	Q9BZP3	86 aa		12.33	□□□□□ -0.44
PRPF8-216	ENST00000577001	ARHGAP32	A7KAX9	2087 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	SCO2	A0A1W2PP80	73 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	AMBP	P02760	352 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	ZNF705D	P0CH99	300 aa	Predicted RBP	12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	ZNF705B	P0CI00	300 aa	Predicted RBP	12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	ARL14EPL	P0DKL9	152 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	RAB4B	P61018	213 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	FXYD3	Q14802	87 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	LYG1	Q8N1E2	194 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	TCEAL7	Q9BRU2	100 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	RIMS4	Q9H426	269 aa	Predicted RBP	12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	LGALS4	P56470	323 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	C22orf34	Q6ZV56	151 aa		12.32	□□□□□ -0.44
PRPF8-216	ENST00000577001	BTBD17	A6NE02	478 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001		H3BTX0	84 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	TOX4	O94842	621 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	ZNF645	Q8N7E2	425 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	RPH3AL	Q9UNE2	315 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	SPG11	Q96JI7	2443 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	AHRR	A9YTQ3	701 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	IFNA1	P01562	189 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	CBLN1	P23435	193 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	PRDX2	P32119	198 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	DCHS2	Q6V1P9	2916 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	C14orf144	Q96I85	54 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	MS4A5	Q9H3V2	200 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	CHD8	Q9HCK8	2581 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001		F2Z2F3	143 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	MMP23A	O75900	390 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	PAX6	P26367	422 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	CD82	P27701	267 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	GNB1	P62873	340 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	MSMO1	Q15800	293 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	ACP7	Q6ZNF0	438 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001		Q8TCH9	128 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	LRFN3	Q9BTN0	628 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	NAT8	Q9UHE5	227 aa		12.31	□□□□□ -0.44
PRPF8-216	ENST00000577001	COX5A	P20674	150 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	CCL8	P80075	99 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	CATR1	Q13166	79 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	GABRA6	Q16445	453 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	GP6	Q9HCN6	339 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	SEPSECS	Q9HD40	501 aa	Known RBP	12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	CBLN4	Q9NTU7	201 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	ZMAT5	Q9UDW3	170 aa	Known RBP	12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	CA1	P00915	261 aa	Predicted RBP	12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	SAXO1	Q8IYX7	474 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001		Q8NFD4	153 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	SGMS2	Q8NHU3	365 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR2V2	Q96R30	315 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	CCL13	Q99616	98 aa		12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	TET2	Q6N021	2002 aa	Predicted RBP	12.3	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A10P	A6NDY2	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A18P	A6NE21	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A16P	A6NEW6	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A20P	A6NIJ5	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A8P	A6NJQ4	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A7P	A6NKC0	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A22P	A8MWA6	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A12P	A8MX19	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A5P	A8MXJ8	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A23P	A8MXZ1	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	YKT6	O15498	198 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A15P	P0C7V4	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A13P	P0C7W8	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A14P	P0C7W9	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM90A24P	P0C7X0	464 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	HLA-DRB5	Q30154	266 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	C19orf35	Q6ZS72	473 aa		12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms