RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 KIAA1456Q9P272 454 aa6.8□□□□□ -1.32
NUP88-211ENST00000575976 METTL1Q9UBP6 276 aaKnown RBP6.8□□□□□ -1.32
NUP88-211ENST00000575976 FLVCR2Q9UPI3 526 aa6.8□□□□□ -1.32
NUP88-211ENST00000575976 MEGF8Q7Z7M0 2845 aa6.8□□□□□ -1.32
NUP88-211ENST00000575976 TEX13DA0A0J9YY54 714 aaPredicted RBP6.79□□□□□ -1.32
NUP88-211ENST00000575976 TMEM89A2RUT3 159 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 CRYM-AS1A6NIL9 109 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 FCN1O00602 326 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 SLC25A17O43808 307 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 NDUFA7O95182 113 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 SPDEFO95238 335 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 HPRT1P00492 218 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 AKR1C4P17516 323 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 RAG2P55895 527 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 ASAH1Q13510 395 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 PLGLAQ15195 96 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 SP6Q3SY56 376 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 C9orf152Q5JTZ5 239 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 LIN54Q6MZP7 749 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 TMED4Q7Z7H5 227 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 VKORC1L1Q8N0U8 176 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 TCTEX1D1Q8N7M0 179 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 CD300LFQ8TDQ1 290 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 CLCC1Q96S66 551 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 C19orf24Q9BVV8 132 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 PRSS22Q9GZN4 317 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 C16orf95Q9H693 158 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 NAA60Q9H7X0 242 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 PLEKHA2Q9HB19 425 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 SIGLEC9Q9Y336 463 aa6.79□□□□□ -1.32
NUP88-211ENST00000575976 LINC01548A6NM66 108 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 H0Y980 276 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 HRASP01112 189 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 IGKV1-39P01597 117 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 IGKV1D-39P04432 117 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 TCRBP04435 133 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 OR5AC1P0C628 307 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 SAA1P0DJI8 122 aaPredicted RBP6.78□□□□□ -1.32
NUP88-211ENST00000575976 RPA2P15927 270 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 MDKP21741 143 aaPredicted RBP6.78□□□□□ -1.32
NUP88-211ENST00000575976 SLC6A1P30531 599 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 TAS2R31P59538 309 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 UBE2KP61086 200 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 SUPT4H1P63272 117 aaKnown RBP6.78□□□□□ -1.32
NUP88-211ENST00000575976 DHODHQ02127 395 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 MRGPRG-AS1Q2M3A8 158 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 TMEM95Q3KNT9 176 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 VMA21Q3ZAQ7 101 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 MZT2BQ6NZ67 158 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 SSX9Q7RTT3 188 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 SGPP2Q8IWX5 399 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 Q8N2B8 174 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 CENPSQ8N2Z9 138 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 TEX45Q8NA69 505 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 OR4F5Q8NH21 305 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 LINC01006Q8NI28 216 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 R3HDM4Q96D70 268 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 HSPB9Q9BQS6 159 aa6.78□□□□□ -1.32
NUP88-211ENST00000575976 FAM212BQ9NTI7 297 aaPredicted RBP6.78□□□□□ -1.32
NUP88-211ENST00000575976 IGHV7-81A0A0B4J1V7 117 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 FAM240BA0A1B0GVZ2 78 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 CLPSL1A2RUU4 121 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 ARPC1BO15143 372 aaKnown RBP6.77□□□□□ -1.33
NUP88-211ENST00000575976 OR2A4O95047 310 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 CA2P00918 260 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 KRASP01116 189 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 IGHG2P01859 326 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 HLA-DRB1P01911 266 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 SERPINE2P07093 398 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 IL6RP08887 468 aaPredicted RBP6.77□□□□□ -1.33
NUP88-211ENST00000575976 NQO2P16083 231 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 ANXA7P20073 488 aaKnown RBP6.77□□□□□ -1.33
NUP88-211ENST00000575976 UCP1P25874 307 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 G6PCP35575 357 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 CX3CL1P78423 397 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 PJVKQ0ZLH3 352 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 FOXL1Q12952 345 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 TMEM187Q14656 261 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 POU2AF1Q16633 256 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 TRIM16LQ309B1 348 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 TMEM128Q5BJH2 165 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 ARSJQ5FYB0 599 aaPredicted RBP6.77□□□□□ -1.33
NUP88-211ENST00000575976 SLC35E3Q7Z769 313 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 SLC25A42Q86VD7 318 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 PPP1R27Q86WC6 154 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 PUSL1Q8N0Z8 303 aaKnown RBP6.77□□□□□ -1.33
NUP88-211ENST00000575976 DMBX1Q8NFW5 382 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 OR2T6Q8NHC8 308 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 GLYATL2Q8WU03 294 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 GALNT14Q96FL9 552 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 RHOVQ96L33 236 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 OR2A7Q96R45 310 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 AIFM2Q9BRQ8 373 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 C20orf85Q9H1P6 137 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 SERTAD4Q9NUC0 356 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 PRR13Q9NZ81 148 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 COMMD9Q9P000 198 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 KCNIP3Q9Y2W7 256 aa6.77□□□□□ -1.33
NUP88-211ENST00000575976 PKD1L1Q8TDX9 2849 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms