RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 DHODHQ02127 395 aa14.43□□□□□ -0.1
CCDC40-213ENST00000574933 TEX45Q8NA69 505 aa14.43□□□□□ -0.1
CCDC40-213ENST00000574933 ADAD2Q8NCV1 583 aaKnown RBP14.43□□□□□ -0.1
CCDC40-213ENST00000574933 AIFM2Q9BRQ8 373 aa14.43□□□□□ -0.1
CCDC40-213ENST00000574933 PALMDQ9NP74 551 aa14.43□□□□□ -0.1
CCDC40-213ENST00000574933 HLA-DRB1P01911 266 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 RPA2P15927 270 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 UCP1P25874 307 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 DEFA1P59665 94 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 DEFA3P59666 94 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 VMA21Q3ZAQ7 101 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 TMEM128Q5BJH2 165 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 SLC25A42Q86VD7 318 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 PUSL1Q8N0Z8 303 aaKnown RBP14.42□□□□□ -0.1
CCDC40-213ENST00000574933 TP53RKQ96S44 253 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 RASL11BQ9BPW5 248 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 SIGLEC9Q9Y336 463 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 MMP24Q9Y5R2 645 aa14.42□□□□□ -0.1
CCDC40-213ENST00000574933 TEX13DA0A0J9YY54 714 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-213ENST00000574933 TMEM89A2RUT3 159 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 SLC25A17O43808 307 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 PEX14O75381 377 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 S1PR2O95136 353 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 IGHG2P01859 326 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 TCRBP04435 133 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 IL6RP08887 468 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-213ENST00000574933 NQO2P16083 231 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 LPAR6P43657 344 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 RAG2P55895 527 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 SUPT4H1P63272 117 aaKnown RBP14.41□□□□□ -0.1
CCDC40-213ENST00000574933 KRTAP21-3Q3LHN1 58 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 Q6ZS46 218 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 SGPP2Q8IWX5 399 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 CENPSQ8N2Z9 138 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 GLYATL2Q8WU03 294 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 TMEM158Q8WZ71 300 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 RHOVQ96L33 236 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 TMEM222Q9H0R3 208 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 FBXL15Q9H469 300 aa14.41□□□□□ -0.1
CCDC40-213ENST00000574933 METTL1Q9UBP6 276 aaKnown RBP14.41□□□□□ -0.1
CCDC40-213ENST00000574933 A0A1B0GUS0 222 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 FAM240BA0A1B0GVZ2 78 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 SAA1P0DJI8 122 aaPredicted RBP14.4□□□□□ -0.1
CCDC40-213ENST00000574933 MRGPRG-AS1Q2M3A8 158 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 LIN54Q6MZP7 749 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 DUSP18Q8NEJ0 188 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 OR4F5Q8NH21 305 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 VSTM2AQ8TAG5 236 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 ALX4Q9H161 411 aaPredicted RBP14.4□□□□□ -0.1
CCDC40-213ENST00000574933 BET1LQ9NYM9 111 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 ZNF580Q9UK33 172 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 KCNIP3Q9Y2W7 256 aa14.4□□□□□ -0.1
CCDC40-213ENST00000574933 FBN1P35555 2871 aaKnown RBP14.4□□□□□ -0.1
CCDC40-213ENST00000574933 CDS2O95674 445 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 IGKV1-39P01597 117 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 IGKV1D-39P04432 117 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 SERPINE2P07093 398 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 FGF2P09038 288 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 OR5AC1P0C628 307 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 AKR1C4P17516 323 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 MECP2P51608 486 aaKnown RBP14.39□□□□□ -0.11
CCDC40-213ENST00000574933 TMED4Q7Z7H5 227 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 PPP1R27Q86WC6 154 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 LINC01006Q8NI28 216 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 TMEM167AQ8TBQ9 72 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 R3HDM4Q96D70 268 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 FLVCR2Q9UPI3 526 aa14.39□□□□□ -0.11
CCDC40-213ENST00000574933 IGHV7-81A0A0B4J1V7 117 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 SH2D7A6NKC9 451 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-213ENST00000574933 ARPC1BO15143 372 aaKnown RBP14.38□□□□□ -0.11
CCDC40-213ENST00000574933 OR2A4O95047 310 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 COMPP49747 757 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-213ENST00000574933 FOXL1Q12952 345 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 TMEM187Q14656 261 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 SP6Q3SY56 376 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 ZNF562Q6V9R5 426 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 OR4A5Q8NH83 315 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 OR2T6Q8NHC8 308 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 TAF15Q92804 592 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCDC40-213ENST00000574933 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 TMEM56Q96MV1 263 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 OR2A7Q96R45 310 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 C19orf24Q9BVV8 132 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 C20orf85Q9H1P6 137 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 TPSG1Q9NRR2 321 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 SERTAD4Q9NUC0 356 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 TMEM56-RWDD3S4R434 201 aa14.38□□□□□ -0.11
CCDC40-213ENST00000574933 CLPSL1A2RUU4 121 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 MARCH11A6NNE9 402 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 FCN1O00602 326 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 KCNAB3O43448 404 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 KBTBD11O94819 623 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 CRIP2P52943 208 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-213ENST00000574933 SSBP2P81877 361 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-213ENST00000574933 PLGLAQ15195 96 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 PRSS8Q16651 343 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 OR4A47Q6IF82 309 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 NRARPQ7Z6K4 114 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 VKORC1L1Q8N0U8 176 aa14.37□□□□□ -0.11
CCDC40-213ENST00000574933 ENKURQ8TC29 256 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms