RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 A0A1B0GW64 132 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 TMEM127O75204 238 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 SLC22A5O76082 557 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 TRBV12-3P01733 135 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 APELAP0DMC3 54 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 SPNP16150 400 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 AADACP22760 399 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 CD40LGP29965 261 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 ZNF45Q02386 682 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 CBX3Q13185 183 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 KLF5Q13887 457 aaPredicted RBP13.34□□□□□ -0.27
SMG6-214ENST00000573827 CDK10Q15131 360 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 C10orf55Q5SWW7 151 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 ZNF343Q6P1L6 599 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 KCTD9Q7L273 389 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 GPHA2Q96T91 129 aa13.34□□□□□ -0.27
SMG6-214ENST00000573827 CSMD3Q7Z407 3707 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 STARD9Q9P2P6 4700 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 TRBV9A0A0B4J1U6 114 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 RPS19P39019 145 aaKnown RBP13.33□□□□□ -0.28
SMG6-214ENST00000573827 MSMO1Q15800 293 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 TNXAQ16473 311 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 OR2B11Q5JQS5 317 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 VKORC1L1Q8N0U8 176 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 PUSL1Q8N0Z8 303 aaKnown RBP13.33□□□□□ -0.28
SMG6-214ENST00000573827 HSD17B10Q99714 261 aaKnown RBP13.33□□□□□ -0.28
SMG6-214ENST00000573827 RANGRFQ9HD47 186 aaPredicted RBP13.33□□□□□ -0.28
SMG6-214ENST00000573827 ZNF355PQ9NSJ1 428 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 ANAPC10Q9UM13 185 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 RYR2Q92736 4967 aa13.33□□□□□ -0.28
SMG6-214ENST00000573827 A0A0G2JLM5 398 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 C13orf42A0A1B0GVH6 325 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 TEX22C9J3V5 150 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 E7EUB6 86 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 IGLV1-51P01701 117 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 OR9G9P0C7N8 305 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 NHLRC4P0CG21 123 aaPredicted RBP13.32□□□□□ -0.28
SMG6-214ENST00000573827 FCGR2CP31995 323 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 HAPLN4Q86UW8 402 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 MFSD4AQ8N468 514 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 CCL28Q9NRJ3 127 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 ADAM30Q9UKF2 790 aa13.32□□□□□ -0.28
SMG6-214ENST00000573827 ANKRD34BA5PLL1 514 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 XRCC3O43542 346 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 AIREO43918 545 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 IL6RP08887 468 aaPredicted RBP13.31□□□□□ -0.28
SMG6-214ENST00000573827 ZP3P21754 424 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 ZNF66Q6ZN08 573 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 MMD2Q8IY49 270 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 TTC9CQ8N5M4 171 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 TSPAN14Q8NG11 270 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 OR13F1Q8NGS4 319 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 TMEM167AQ8TBQ9 72 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 USMG5Q96IX5 58 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 AKIP1Q9NQ31 210 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 COA4Q9NYJ1 87 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 TAS2R8Q9NYW2 309 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 PRELID3BQ9Y3B1 194 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
SMG6-214ENST00000573827 A0A087WXM4 84 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 PPYP01298 95 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 PRH1P02810 166 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 GP9P14770 177 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 KLK9Q2XQG4 91 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 TIMM50Q3ZCQ8 353 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 C19orf35Q6ZS72 473 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 OR4S2Q8NH73 311 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 TCTEX1D2Q8WW35 142 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 ACOT12Q8WYK0 555 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 DIABLOQ9NR28 239 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 PEF1Q9UBV8 284 aaKnown RBP13.3□□□□□ -0.28
SMG6-214ENST00000573827 KLK9Q9UKQ9 250 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
SMG6-214ENST00000573827 SMAD5-AS1Q9Y6J3 95 aa13.3□□□□□ -0.28
SMG6-214ENST00000573827 KBTBD11O94819 623 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 OR2A4O95047 310 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 LY86O95711 162 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 FCER2P06734 321 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 ARPC4P59998 168 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 RHOGP84095 191 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 CROCCP3Q8IVE0 287 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 Q8N1Y9 231 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 OR6Q1Q8NGQ2 317 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 SECTM1Q8WVN6 248 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 GIMAP1Q8WWP7 306 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 WWC2-AS2Q96NR7 200 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 OR2A7Q96R45 310 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 PHB2Q99623 299 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 SPIN2AQ99865 258 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 ASCL2Q99929 193 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 SPIN2BQ9BPZ2 258 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 U3KQK5 164 aa13.29□□□□□ -0.28
SMG6-214ENST00000573827 HMX3A6NHT5 357 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 CGB1A6NKQ9 187 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 BMPR1BO00238 502 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 RBFOX2O43251 390 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■■■■□ 23.3
SMG6-214ENST00000573827 TNFSF12O43508 249 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 TNFAIP8O95379 198 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 ZNF735P0CB33 412 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 NAT1P18440 290 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms