RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FCGR3BO75015 233 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 PPYP01298 95 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 SAA1P0DJI8 122 aaPredicted RBP13.31□□□□□ -0.28
SMG6-212ENST00000573153 SMIM18P0DKX4 95 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 PTHLHP12272 177 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 NAT1P18440 290 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 AADACP22760 399 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 FCGR2CP31995 323 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 TPPP2P59282 170 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 TAS2R20P59543 309 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 CDK10Q15131 360 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 DEFB121Q5J5C9 76 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 MFSD4AQ8N468 514 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 OR4S2Q8NH73 311 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 MS4A10Q96PG2 267 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 SORL1Q92673 2214 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 J3QRK9 145 aa13.3□□□□□ -0.28
SMG6-212ENST00000573153 OVOL1O14753 267 aa13.3□□□□□ -0.28
SMG6-212ENST00000573153 NCS1P62166 190 aa13.3□□□□□ -0.28
SMG6-212ENST00000573153 DEFA5Q01523 94 aa13.3□□□□□ -0.28
SMG6-212ENST00000573153 DCTN2Q13561 401 aaKnown RBP13.3□□□□□ -0.28
SMG6-212ENST00000573153 TMEM69Q5SWH9 247 aa13.3□□□□□ -0.28
SMG6-212ENST00000573153 DNAH7Q8WXX0 4024 aa13.3□□□□□ -0.28
SMG6-212ENST00000573153 A0A0G2JLM5 398 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 RBFOX2O43251 390 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■■■□ 23.3
SMG6-212ENST00000573153 APOA1P02647 267 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 TRGV3P03979 118 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 HSPB1P04792 205 aaKnown RBP13.29□□□□□ -0.28
SMG6-212ENST00000573153 ECI1P42126 302 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 KIR2DS2P43631 304 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 VBP1P61758 197 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 ACSM6Q6P461 480 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 DHRS11Q6UWP2 260 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 IDO2Q6ZQW0 420 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 ANKRD13BQ86YJ7 626 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 MMD2Q8IY49 270 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 PUSL1Q8N0Z8 303 aaKnown RBP13.29□□□□□ -0.28
SMG6-212ENST00000573153 VSTM2AQ8TAG5 236 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 SRSF12Q8WXF0 261 aaKnown RBP13.29□□□□□ -0.28
SMG6-212ENST00000573153 ACOT12Q8WYK0 555 aa13.29□□□□□ -0.28
SMG6-212ENST00000573153 TINAGL1Q9GZM7 467 aaPredicted RBP13.29□□□□□ -0.28
SMG6-212ENST00000573153 ZNF430Q9H8G1 570 aaPredicted RBP13.29□□□□□ -0.28
SMG6-212ENST00000573153 MSGN1A6NI15 193 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 GABARAPO95166 117 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 DYRK1AQ13627 763 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 TNXAQ16473 311 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 CTF1Q16619 201 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 VAX1Q5SQQ9 334 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 ZNF429Q86V71 674 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 ADAD2Q8NCV1 583 aaKnown RBP13.28□□□□□ -0.28
SMG6-212ENST00000573153 OR5T1Q8NG75 326 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 SECTM1Q8WVN6 248 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 TCTEX1D2Q8WW35 142 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 IFT46Q9NQC8 304 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 CCL28Q9NRJ3 127 aa13.28□□□□□ -0.28
SMG6-212ENST00000573153 ZNF256Q9Y2P7 627 aaPredicted RBP13.28□□□□□ -0.28
SMG6-212ENST00000573153 A0A1B0GW64 132 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 OR2A4O95047 310 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 EIF4EP06730 217 aaKnown RBP13.27□□□□□ -0.29
SMG6-212ENST00000573153 PRSS3P35030 304 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 IL34Q6ZMJ4 242 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 TMEM167AQ8TBQ9 72 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 BORCS5Q969J3 196 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 USMG5Q96IX5 58 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 OR2A7Q96R45 310 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 GPHA2Q96T91 129 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 SPIN2AQ99865 258 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 SPIN2BQ9BPZ2 258 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 DCUN1D5Q9BTE7 237 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 TAS2R8Q9NYW2 309 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 ADAM30Q9UKF2 790 aa13.27□□□□□ -0.29
SMG6-212ENST00000573153 C13orf42A0A1B0GVH6 325 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 KBTBD11O94819 623 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 HRASP01112 189 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 TRBV12-3P01733 135 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 OR9G9P0C7N8 305 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 MAS1LP35410 378 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 TAS2R46P59540 309 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 ZNF45Q02386 682 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 OR2B11Q5JQS5 317 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 C10orf55Q5SWW7 151 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 GPX8Q8TED1 209 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 AIFM2Q9BRQ8 373 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 SLC5A7Q9GZV3 580 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 SCPEP1Q9HB40 452 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 RANGRFQ9HD47 186 aaPredicted RBP13.26□□□□□ -0.29
SMG6-212ENST00000573153 ZNF355PQ9NSJ1 428 aa13.26□□□□□ -0.29
SMG6-212ENST00000573153 TRBV9A0A0B4J1U6 114 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 MEIS3P1A6NDR6 274 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 E7EUB6 86 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 FGF2P09038 288 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 APELAP0DMC3 54 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 ZP3P21754 424 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 RORCP51449 518 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 CD69Q07108 199 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 POU2AF1Q16633 256 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 ZNF343Q6P1L6 599 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 ZNF818PQ6ZRF7 136 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms