RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 A0A0G2JLM5 398 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 TMEM272A0A1B0GTI8 110 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 H3BUA1 57 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 APOA2P02652 100 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 HSPB1P04792 205 aaKnown RBP7.13□□□□□ -1.27
CIITA-208ENST00000572665 GP9P14770 177 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 SRMP19623 302 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 ZP3P21754 424 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 CNTFRP26992 372 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 OR3A3P47888 321 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 TPPP2P59282 170 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 KIAA0141Q14154 515 aaPredicted RBP7.13□□□□□ -1.27
CIITA-208ENST00000572665 TRAM1Q15629 374 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 MOGAT2Q3SYC2 334 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 C1orf100Q5SVJ3 147 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 RNLSQ5VYX0 342 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 FAM131AQ6UXB0 335 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 ZNF562Q6V9R5 426 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 C6orf201Q7Z4U5 140 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 PPP1R27Q86WC6 154 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 BPIFB6Q8NFQ5 453 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 MUC7Q8TAX7 377 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 TMEM68Q96MH6 324 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 RCHY1Q96PM5 261 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 KRTAP4-11Q9BYQ6 195 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 TOLLIPQ9H0E2 274 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 FBXL15Q9H469 300 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 PLGRKTQ9HBL7 147 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 PALMDQ9NP74 551 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 C13orf42A0A1B0GVH6 325 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 DENRO43583 198 aaKnown RBP7.12□□□□□ -1.27
CIITA-208ENST00000572665 ARL6IP5O75915 188 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 NAPSAO96009 420 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 FGF2P09038 288 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 CT45A6P0DMU7 189 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 CT45A5P0DMU8 189 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 CT45A7P0DMV0 189 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 ARSBP15848 533 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 PSMA1P25786 263 aaKnown RBP7.12□□□□□ -1.27
CIITA-208ENST00000572665 CEACAM6P40199 344 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 SERPINB10P48595 397 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 PSMD7P51665 324 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 CX3CL1P78423 397 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 HLA-DRB3P79483 266 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 SPHARQ15513 63 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 TATDN3Q17R31 274 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 PXDC1Q5TGL8 231 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 ZNF880Q6PDB4 577 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 CEACAM19Q7Z692 300 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 PDPNQ86YL7 162 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 SGPP2Q8IWX5 399 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 UFD1Q92890 307 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 DLX4Q92988 240 aaPredicted RBP7.12□□□□□ -1.27
CIITA-208ENST00000572665 TMEM18Q96B42 140 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 TMED9Q9BVK6 235 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 RANGRFQ9HD47 186 aaPredicted RBP7.12□□□□□ -1.27
CIITA-208ENST00000572665 C12orf4Q9NQ89 552 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 ZNF355PQ9NSJ1 428 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 METTL1Q9UBP6 276 aaKnown RBP7.12□□□□□ -1.27
CIITA-208ENST00000572665 STUB1Q9UNE7 303 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 NUBP2Q9Y5Y2 271 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 A3GALT2U3KPV4 340 aa7.12□□□□□ -1.27
CIITA-208ENST00000572665 TMEM14DPA8MWL7 114 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 H0YJW9 148 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 CNIH1O95406 144 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 TRGV3P03979 118 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 CDK1P06493 297 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 SPNP16150 400 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 ARL3P36405 182 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 MED22Q15528 200 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 RPL39P5Q59GN2 51 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 LRRTM1Q86UE6 522 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.11□□□□□ -1.27
CIITA-208ENST00000572665 OR56B1Q8NGI3 324 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 ARPC1AQ92747 370 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 PTX4Q96A99 478 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 ABHD14BQ96IU4 210 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 SCPEP1Q9HB40 452 aa7.11□□□□□ -1.27
CIITA-208ENST00000572665 IGHV4OR15-8A0A075B7B6 117 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 A0A087WW49 117 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 PRSS47A8MTI9 375 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 PTGES3LE9PB15 166 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 H0Y980 276 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 SLC17A2O00624 439 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 CA2P00918 260 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 UCHL1P09936 223 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 FRMD6-AS1P0C7T7 363 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 AADACP22760 399 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 CRHBPP24387 322 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 LGALS7P47929 136 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 UNC119Q13432 240 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 TPBGQ13641 420 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 FXYD3Q14802 87 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 PSG5Q15238 335 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 OR10K2Q6IF99 312 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 GLDNQ6ZMI3 551 aaPredicted RBP7.1□□□□□ -1.27
CIITA-208ENST00000572665 SBSPONQ8IVN8 264 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 TEX45Q8NA69 505 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 LFNGQ8NES3 379 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms