RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 IGHG2P01859 326 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 S100GP29377 79 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 CCR6P51684 374 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 PROK1P58294 105 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 UBE2KP61086 200 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 CCDC71LQ8N9Z2 235 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 OR2T6Q8NHC8 308 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 BEX1Q9HBH7 125 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 FAM212BQ9NTI7 297 aaPredicted RBP17.45■□□□□ 0.38
RAB40B-207ENST00000572603 C14orf166Q9Y224 244 aaKnown RBP17.45■□□□□ 0.38
RAB40B-207ENST00000572603 LINC01548A6NM66 108 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 SAA1P0DJI8 122 aaPredicted RBP17.44■□□□□ 0.38
RAB40B-207ENST00000572603 SSBP2P81877 361 aaPredicted RBP17.44■□□□□ 0.38
RAB40B-207ENST00000572603 NDPQ00604 133 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 C9orf152Q5JTZ5 239 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 VKORC1L1Q8N0U8 176 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 ADAD2Q8NCV1 583 aaKnown RBP17.44■□□□□ 0.38
RAB40B-207ENST00000572603 CD300LFQ8TDQ1 290 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 TP53RKQ96S44 253 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 COMMD9Q9P000 198 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 COPZ2Q9P299 210 aa17.44■□□□□ 0.38
RAB40B-207ENST00000572603 IGHV7-81A0A0B4J1V7 117 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 A0A1B0GUS0 222 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 H0Y980 276 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 FCN1O00602 326 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 LYRM1O43325 122 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 HPRT1P00492 218 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 VDAC2P45880 294 aaPredicted RBP17.43■□□□□ 0.38
RAB40B-207ENST00000572603 POU2AF1Q16633 256 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 PUSL1Q8N0Z8 303 aaKnown RBP17.43■□□□□ 0.38
RAB40B-207ENST00000572603 POC5Q8NA72 575 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 SLC25A21Q9BQT8 299 aaPredicted RBP17.43■□□□□ 0.38
RAB40B-207ENST00000572603 WNT10AQ9GZT5 417 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 PLEKHA2Q9HB19 425 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 RNF114Q9Y508 228 aa17.43■□□□□ 0.38
RAB40B-207ENST00000572603 CRYM-AS1A6NIL9 109 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 CENPXA8MT69 81 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 NDUFB6O95139 128 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 IGKV1-39P01597 117 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 IGKV1D-39P04432 117 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 LPAR6P43657 344 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 TAS2R31P59538 309 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 RBMS2Q15434 407 aaKnown RBP17.42■□□□□ 0.38
RAB40B-207ENST00000572603 VMA21Q3ZAQ7 101 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 LIN54Q6MZP7 749 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 SLC35E3Q7Z769 313 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 TEX45Q8NA69 505 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 WIPF2Q8TF74 440 aaPredicted RBP17.42■□□□□ 0.38
RAB40B-207ENST00000572603 SCGB3A2Q96PL1 93 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 NAA60Q9H7X0 242 aa17.42■□□□□ 0.38
RAB40B-207ENST00000572603 C3orf85A0A1B0GTC6 90 aa17.41■□□□□ 0.38
RAB40B-207ENST00000572603 CA2P00918 260 aa17.41■□□□□ 0.38
RAB40B-207ENST00000572603 PJVKQ0ZLH3 352 aa17.41■□□□□ 0.38
RAB40B-207ENST00000572603 ASAH1Q13510 395 aa17.41■□□□□ 0.38
RAB40B-207ENST00000572603 PLGLAQ15195 96 aa17.41■□□□□ 0.38
RAB40B-207ENST00000572603 PPP1R27Q86WC6 154 aa17.41■□□□□ 0.38
RAB40B-207ENST00000572603 RHOVQ96L33 236 aa17.41■□□□□ 0.38
RAB40B-207ENST00000572603 DNHD1Q96M86 4753 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 KCNAB3O43448 404 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 HRASP01112 189 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 NQO2P16083 231 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 UCP1P25874 307 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 ARSJQ5FYB0 599 aaPredicted RBP17.4■□□□□ 0.38
RAB40B-207ENST00000572603 WFDC12Q8WWY7 111 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 R3HDM4Q96D70 268 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 CLCC1Q96S66 551 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 FBXO7Q9Y3I1 522 aa17.4■□□□□ 0.38
RAB40B-207ENST00000572603 ARPC1BO15143 372 aaKnown RBP17.39■□□□□ 0.37
RAB40B-207ENST00000572603 KBTBD11O94819 623 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 IL6RP08887 468 aaPredicted RBP17.39■□□□□ 0.37
RAB40B-207ENST00000572603 OR5AC1P0C628 307 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 SLC6A1P30531 599 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 KRTAP10-3P60369 221 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 SUPT4H1P63272 117 aaKnown RBP17.39■□□□□ 0.37
RAB40B-207ENST00000572603 CX3CL1P78423 397 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 PRSS8Q16651 343 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 SP6Q3SY56 376 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 OR4A47Q6IF82 309 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 SSX9Q7RTT3 188 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 KLHDC1Q8N7A1 406 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 TMEM167AQ8TBQ9 72 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 NOL4LQ96MY1 436 aaPredicted RBP17.39■□□□□ 0.37
RAB40B-207ENST00000572603 OR51J1Q9H342 316 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 BET1LQ9NYM9 111 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 ZNF580Q9UK33 172 aa17.39■□□□□ 0.37
RAB40B-207ENST00000572603 TET2Q6N021 2002 aaPredicted RBP17.38■□□□□ 0.37
RAB40B-207ENST00000572603 MARCH11A6NNE9 402 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 ATP6V0E1O15342 81 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 OR2A4O95047 310 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 TMED4Q7Z7H5 227 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 GALNT14Q96FL9 552 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 OR2A7Q96R45 310 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 ZNF430Q9H8G1 570 aaPredicted RBP17.38■□□□□ 0.37
RAB40B-207ENST00000572603 LINC00527Q9UJ94 153 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 FLVCR2Q9UPI3 526 aa17.38■□□□□ 0.37
RAB40B-207ENST00000572603 TEX13DA0A0J9YY54 714 aaPredicted RBP17.37■□□□□ 0.37
RAB40B-207ENST00000572603 AP4M1O00189 453 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 B3GALNT1O75752 331 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 IGF1P05019 195 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 EGR2P11161 476 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms